Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04009 ATGTCCCCTCTAAACCCCACCGGAAATTCCTTCGTATCCGACGCCGATGACATTCCGTTCGGCACCGTTTGGTGGTTTGTCTACGCCGGAATTTCTTGTCTTCTCATTATCTTTGCCGGTATGATGTCTGGACTCACCATTGGGTTAATGACCTTCGGTCCTGTTGACCTTGAAATTCTCCAAAGAAGTGGTTCTTCCACCGAGAAAAAACAAGCCGCTGCTATTTTTCCTGTTCGTCAAAAACAACACCAACTGCTTGTTACTTTGCTCCTGTGTAATGCTTGTGCCATGGAGGCACTTCCGATTTACCTTGATAAGATTTTTCATCCCTTTGTAGCAGTGTTGTTATCAGTAACTTTTGTTCTGGCTTTTGGAGAGATCATTCCACAAGCTATATGCTCAAGATATGGGCTTTATGTTGGTGCGAGTTTTGTTGGGCTTGTACGCGCTCTGATGATCATTTGCTATCCGATTGCTTGCCCTATTGGAAAGGTTTTGGATGTTTTGCTTGGACACCATTGTGCACTGTTTAGACGAGCACAATTGAAAGCCCTTGTTTCAATCCATAGCGAAGAGGCTGGTAAAGGAGGTGAACTCACACATGATGAGGCGACGATTATCAGTGGAGCATTAGATCTCACTCTGAAGACTGCAGAGGAGGCTATGACACCAATCGAGTCAACTTTTTCCTTGGATGTTGCTTCAAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGAACGAGGTCATAGTCGCATCCCTGTATACAGTGGAAATCCCAAAAATATAATTGGTCTCTTACTAGTAAAAAATCTTCTTACTATAAGAGCTGAGGCAGAGAGTCCAGTTAGTTCTGTCTCCATCCGGAAAATTCCTAGGGTTCCAGCACATATGCCTCTATACGATATCCTCAACGAGTTTCAAAAAGGTAGCAGTCATATGGCAGCTGTAGTCAAGGTTATAAGCGAGAAAAACAACCCTCAGGTAGCTAGTGACTTCGACAAATCCAAAGAAGAAGTATTCATCAAACATCGTTCTGAACTGACTGTGCCGTTGCTAGTCGGGTCTTATGAGAAATCAGACAATGCTGTCGATATTGACAAGCTTTCTAGACATCAAAACCATGGAGGATGTGATGATGCCAACAATACCGACCAACATTGCCTAGAAAATGAAACTCCGCCAAATTGTTTCCATCACTTTCCTTATGATAAAGACGGGGAAGTTATTGGCATCATAACCTTGGAAGATGTTTTCGAAGAACTCCTGCAGGAAGAAATTGTGGATGAGACAGATGTGTATATTGATGTACACAGGAGAATACGTGTTGCTGCTGTTGCAGCTGCTTCATCTGTGGCTCGAGTTCCATTAGGCCAAAAGGTGAAAGTTGGAGCAAGCTTGTAG 1404 0.433 MSPLNPTGNSFVSDADDIPFGTVWWFVYAGISCLLIIFAGMMSGLTIGLMTFGPVDLEILQRSGSSTEKKQAAAIFPVRQKQHQLLVTLLLCNACAMEALPIYLDKIFHPFVAVLLSVTFVLAFGEIIPQAICSRYGLYVGASFVGLVRALMIICYPIACPIGKVLDVLLGHHCALFRRAQLKALVSIHSEEAGKGGELTHDEATIISGALDLTLKTAEEAMTPIESTFSLDVASKLDWEAIGKILERGHSRIPVYSGNPKNIIGLLLVKNLLTIRAEAESPVSSVSIRKIPRVPAHMPLYDILNEFQKGSSHMAAVVKVISEKNNPQVASDFDKSKEEVFIKHRSELTVPLLVGSYEKSDNAVDIDKLSRHQNHGGCDDANNTDQHCLENETPPNCFHHFPYDKDGEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAASSVARVPLGQKVKVGASL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04009 467 Gene3D - 392 430 IPR046342 -
Vivi6g04009 467 ProSiteProfiles CNNM transmembrane domain profile. 21 203 IPR002550 -
Vivi6g04009 467 FunFam DUF21 domain-containing protein 201 337 - -
Vivi6g04009 467 CDD CBS_pair_CorC_HlyC_assoc 217 318 IPR044751 -
Vivi6g04009 467 Gene3D - 203 333 IPR046342 -
Vivi6g04009 467 PANTHER METAL TRANSPORTER CNNM 9 447 IPR045095 GO:0010960
Vivi6g04009 467 SUPERFAMILY CBS-domain pair 209 424 IPR046342 -
Vivi6g04009 467 Pfam Cyclin M transmembrane N-terminal domain 31 202 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04009 Vivi-Chr6 137206385 137209901 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04009 K16302 - gmx:100777230 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04009 6 137206385 137209901 Vivi6g04009 6 137206385 137209901 ECH