Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03995 ATGGAAGCAACCCGATTCTCTCTTTATCACTTCCATCCCCACAACTTCCGACCCAAACCCACCGCCCTTCTCTCAGGTAGAAGACACGCAGAAATTAGAACTAGGGTTTCACTTTTCCCAAGAGGTTCACATTCGCTTAACCGGAGAATTTCCGTTAACTTCTCCGACCGACTCCGAAGCGATTATATCCGTTCCGAGACGCCGCTTTTGAGTGAAGAACGTGTTCCGGAGACACGTGGCGACGAGGATGAAGCAATTGTTGGTTCTTCTGGCGGTGTTAAGTCGTTAACGTTGGAGGTGAAACCTAGGGCGTTTAAAAATAGGTTTCTGAATTTTGTGCGGTTTGGTTCTGTTATTAATGGTGCTGCTGAGACGTTTTTCAAGAGCGAGATTCGGAGGAGGCTGTTTGTTACTGCTGTGTTGATTGTGATTAGTCGTGTTGGTTATTTTATTCCTCTTCCTGGATTTGATAGGAGGTTGATACCAAAGGATTACATGAGCTTTGTTGCTGGTTCGTCGGTTGATGAACTTGGTGACTTCTCCTCTGAGCTCAAGCTATCTCTTTTCCAGCTTGGAATCAGTCCTCAAATAATAGCGTCCATTATTATGCAGGTTTTCTGTCATGTTGTTCCTTCTCTAGTAAAGTTGCGGAAAGAAGGTTTGGATGGGAATGAGAAGATTAAGAGTTATATTTGGTGGCTGTCGCTGGGCTTTGCAATTATCGAAGCTCTAATAGTTTCTTGCTACTCACTTCCATACTCAATTTACGCTGCTAGTTATAGGTTTAAACATGTAATGCTGACATCTTTTTTTTTGGTTTGTGGTGCAATGACTATTACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTTGGAATACTGATTGGGTATATGGAGACGTTACATAAAATGCTTACTCAGCTTTCAGTGAGTGCTGTTAGTTGGTGGCCATATGTGCTTGCAGTATTGGGTCTCTTCACCATAGTCACTATGTGGGCAGTTGTAGTTACTGAAGGTTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTGCTGCAAGGGAGCAATCACCTATAACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCCTACCTCTTGGCCTTTCCAAGCATTGTCGCTAGTTTGCTTCAGTCACCTTTTTGGGAGCGTGTGAAGGAAATGTTGAATCCCGACTCTTCTATTGGCGCTGAACCATGGGTCTACTATTCTATATATGCCTTCTTTGTCTTCCTTTTCAATATATTTGATATTGCTAACTTGCCAAAGGAAATTGCCGATTACTTGAATAAGATGGGTGCAAGGATACCTAATGTTAAGCCTGGGAAGGCTACGATAGAATACCTCACAAAGGTTCAGGCTTCCACTCGATTCTGGGGGGGCCTACTGTTAAGTATTTTGGCCACTACTTCAAGTGTTCTCGATCATTATTTACGGCGTAAAAATGCTGGATTTGCTATTGGTTTTACATCAATTCTAATTATTGTTGGTTCCATTATTGAACTTAGAAGATCGTATCAAGCATATAACGTGATGCCAGGATTAAGCAATGCTTTGAAACGTTATGGTGTATAA 1668 0.4185 MEATRFSLYHFHPHNFRPKPTALLSGRRHAEIRTRVSLFPRGSHSLNRRISVNFSDRLRSDYIRSETPLLSEERVPETRGDEDEAIVGSSGGVKSLTLEVKPRAFKNRFLNFVRFGSVINGAAETFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMSFVAGSSVDELGDFSSELKLSLFQLGISPQIIASIIMQVFCHVVPSLVKLRKEGLDGNEKIKSYIWWLSLGFAIIEALIVSCYSLPYSIYAASYRFKHVMLTSFFLVCGAMTITWICDTISESGFGQGSSLIICVGILIGYMETLHKMLTQLSVSAVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASAAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVASLLQSPFWERVKEMLNPDSSIGAEPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLTKVQASTRFWGGLLLSILATTSSVLDHYLRRKNAGFAIGFTSILIIVGSIIELRRSYQAYNVMPGLSNALKRYGV 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03995 555 Gene3D SecY subunit domain 119 545 IPR023201 -
Vivi6g03995 555 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 125 542 IPR002208 GO:0015031|GO:0016020
Vivi6g03995 555 FunFam Preprotein translocase subunit SCY2, chloroplastic 119 545 - -
Vivi6g03995 555 Pfam SecY 187 533 IPR002208 GO:0015031|GO:0016020
Vivi6g03995 555 SUPERFAMILY Preprotein translocase SecY subunit 115 540 IPR023201 -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 288 311 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 519 537 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 262 287 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 431 453 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 135 153 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 186 206 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 227 250 - -
Vivi6g03995 555 PRINTS Preprotein translocase SecY subunit signature 386 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03995 1 555 Miscellaneous Gene Families AT2G31530 68.793 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03995 - - gmx:100803256 912.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03995 6 137071171 137077641 Vivi6g03995 6 137071171 137077641 ECH