Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03980 ATGGCTTCCCAAATCTCTGTTTGCGCTAGTGCCATGCTTCCATTTTCTGCTGTGAAACTCCCAGCAGCCAAGTCGAATTATCCTTCCAACCTATCCCTTCAATCATCCTTTCACTCCTTGAGAGGTACCCGTCCTGTTGGAATCATCAAAGCACAGCATGATAAGAACTCTGAGAGTGGATTTCAGCCCATTCATTCACAAGCTTCACAAGACAGCGTGCTTTCTGATGAGGCTGTGAAGAATGATGGATTTGCTGAATCTTTTCACCAGGTTATGGTGACGAACAAGATTAGAGCGCAGATAAATGAGGTGAAGAGGATGCTGAGGTCCATGGAAGATGGAGAGATAAGCATATCAGCTTATGACACAGCCTGGGTTGCCCTGGTGAAAAACGTTGATGATGAAAATAAGCCACAATTCCCATCTTCTCTTCAATGGATTGTGGACAATCAACTTGCTGATGGCTCATGGGGTGATGAGTTATTTGTGGCCCATGACAGGATTCTGAACACCTTGGCATGTGTCATTGCCTTAAAATCATGGAACGTGCACCCTGAGATGTGTGACAAAGGAATGAAGTTTTTTGTGGAAAATCTGAACAAAATTCAAGATGAGAATGCTGAGCACATGCCCATTGGGTTTGAAGTTGCTTTTCCTTCTCTTCTCAATATTGCTAAAAGTTTGAATATTGAAGTGCCTGAAGATTCTCCAATCTTGAAGGAAATATTTTCTATGAGAGACCAAAAGCTCAAAAAAATACCAAGAGATGTGTTGCACAAGGTTCCAACCACATTGCTTCATAGTTTGGAAGGAATGCAGGACTTGGATTGGAACCAACTTCTACAGCTTCAATCTCAAGATGGATCGTTCTTGTTCTCTCCATCCTCCACAGCTTTTGCTATTATGCAAACGGGTGACAAAAATGCTCTCAACTACCTACAGAAAATTGTTGAGAAGTTCAATGGAGGAGTTCCAAATGTCTTCCCGGTGGACTTGTTTGAGCACATATGGGCTGTGGATCGGCTAGAACGCCTTGGAGTTTCGAGATATTTTAAACAAGAGATTAAGGACTCTATGAACTATTTGGCAAGATACTGGACGGAGAAAGGTATTTGTTGGGCGAGAAATTCAGAAGTTCAAGATATTGATGACACGGCAATGGGATTTAGACTTCTCAGGTTGCATGGTCATCAAGTTTCGCCTGATGTGTTCAAGCATTTTGAGAAAGATGGTGAATTCTTCTGTTTTGCGGGACAGGTGAACCAAGCCGTGACAGGCATGTTCAATCTGTATAGAGCTTCTCAAGTGATGTTTAAAGATGAGGAAATTCTTGAGAATGCCAGGAGCTTCTCTGGCAGTTATTTAACGAAGAAACGTTTTGCAAAACAGCTTTTCGATAAATGGATCATAACTAAAGATTTACCTCGCGAGGTTGGTTATGCTCTGGATGTGCCGTGGTATGCTAGTCTACCCCGAGTAGAGGCAAGATTGTACCTTGAGCACTACGGTGGTAAGAATGATGTTTGGATTGGCAAGACCCTTTACAGGATGCCGTACGTGAATAATGATGTTTATCTGGAACTTGCGAAATTGGATTATAATAAGTGTCAAGAAGTGCATAAGAAAGAGTGGGAAGAAATCCAAAGGTGGTACCTGGAATGCGAACTAGAAGGGTTTGGAGTGGACAAAGATAGACTCCAATACGCTTATTTTGTCGCAGCAGCCAGCATATTTGAGCCTGAGAGGTCTTTAGAGAGACTTGCATGGGCTAAAACAAAAATTTTGATCCGGATAATGAAGGCGAAATGTAAAGTTATAGAAACTACAGATGAATTTGGAAATCAGATAAACGAAATCAACAACTTGAATAAGTGGTTAAAGGACAGGTTAGATGAAAAACTCATGGGAGTTTGGCAGACAACCCTTGATCTCATTGGCTTCCAAATGTTTAAGCGCCATGACCAAGAAAATTCACATTATTTGACTCGAATGTGGCAAAGTTGGTTCGCAAGCAAGCATAGTAAAGGACTCAAATCCCCAGGAGATGCCGAACTAATTGTGCAAACAATAATTTTAACCTCTGGCAATTGGTCAGAAGATCTAGAGCTTGATCCTCGGTACCAAAAATTGCTTGACGTCACTAGGAGAGTTTGCCTGAGCATCTATAATTTCGAATACAACTGGGTACAGGTTGGCAGCGATTGCAAGGAAGTAGAGGCAGGGATGCAAGAACTGGTGCAATTGGTGGTTCAAAGTTCTCCAAATGATCTGCCTTCAAGTATCAAGAATACATTCCTCATGGTGGCCAAGAGTTTCTACTATACAGCTTACTGTGATCATGGGACCATTTCCTATCATATTTATAAAGTTCTCTTTCAAAAAGTGATCTGA 2391 0.4166 MASQISVCASAMLPFSAVKLPAAKSNYPSNLSLQSSFHSLRGTRPVGIIKAQHDKNSESGFQPIHSQASQDSVLSDEAVKNDGFAESFHQVMVTNKIRAQINEVKRMLRSMEDGEISISAYDTAWVALVKNVDDENKPQFPSSLQWIVDNQLADGSWGDELFVAHDRILNTLACVIALKSWNVHPEMCDKGMKFFVENLNKIQDENAEHMPIGFEVAFPSLLNIAKSLNIEVPEDSPILKEIFSMRDQKLKKIPRDVLHKVPTTLLHSLEGMQDLDWNQLLQLQSQDGSFLFSPSSTAFAIMQTGDKNALNYLQKIVEKFNGGVPNVFPVDLFEHIWAVDRLERLGVSRYFKQEIKDSMNYLARYWTEKGICWARNSEVQDIDDTAMGFRLLRLHGHQVSPDVFKHFEKDGEFFCFAGQVNQAVTGMFNLYRASQVMFKDEEILENARSFSGSYLTKKRFAKQLFDKWIITKDLPREVGYALDVPWYASLPRVEARLYLEHYGGKNDVWIGKTLYRMPYVNNDVYLELAKLDYNKCQEVHKKEWEEIQRWYLECELEGFGVDKDRLQYAYFVAAASIFEPERSLERLAWAKTKILIRIMKAKCKVIETTDEFGNQINEINNLNKWLKDRLDEKLMGVWQTTLDLIGFQMFKRHDQENSHYLTRMWQSWFASKHSKGLKSPGDAELIVQTIILTSGNWSEDLELDPRYQKLLDVTRRVCLSIYNFEYNWVQVGSDCKEVEAGMQELVQLVVQSSPNDLPSSIKNTFLMVAKSFYYTAYCDHGTISYHIYKVLFQKVI 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03980 796 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 112 296 IPR008930 -
Vivi6g03980 796 Pfam Terpene synthase, N-terminal domain 276 482 IPR001906 GO:0010333|GO:0016829
Vivi6g03980 796 SFLD Terpene Cyclase Like 1 N-term 90 516 - -
Vivi6g03980 796 SUPERFAMILY Terpenoid synthases 521 672 IPR008949 -
Vivi6g03980 796 Pfam Terpene synthase family, metal binding domain 526 671 IPR005630 GO:0000287|GO:0010333|GO:0016829
Vivi6g03980 796 Gene3D - 120 331 - -
Vivi6g03980 796 Gene3D Farnesyl Diphosphate Synthase 536 796 IPR008949 -
Vivi6g03980 796 FunFam Ent-copalyl diphosphate synthase 120 331 - -
Vivi6g03980 796 SFLD Terpene Cyclase Like 1 N-term - Enzymatic 90 516 - -
Vivi6g03980 796 FunFam Ent-copalyl diphosphate synthase, chloroplastic 308 533 - -
Vivi6g03980 796 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 287 507 IPR008930 -
Vivi6g03980 796 Gene3D - 103 534 IPR036965 GO:0010333|GO:0016829
Vivi6g03980 796 PANTHER ENT-COPALYL DIPHOSPHATE SYNTHASE, CHLOROPLASTIC 95 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03980 Vivi-Chr6 136727081 136731799 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03980 K04120 - vvo:131597978 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03980 6 136727081 136731799 Vivi6g03980 6 136727081 136731799 ECH