Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03977 ATGGATACGGTTGAGGAAGTTGAGATTCCAATTCCATCTTCTTCATCTTCATCTTCATCATCAATGGCGAAAAGACCTTGTCCATCTCAAAACCCTAAAATGGAGGTCGAAAATCTCCTCGACGAGTTTCTCTCTCTTTCCGATCGTCCTTCTCTCTCCCTCGATCTCTCCCTAGAGAATCTTCTCCAATCAATGCCTCCCGACTCCGATCTCATCGATCGCGCTCTCAGAATGGGTTCGCTCCTTCTCGATGCCGCCAAACACTCCTCTCGCAAACGCTCTTCCAATCATAATTCGATTGTCTGGCCTTTTCCTCCCGATCTCACCTTCAAGATCTTCTCGATGCTTGATACTCAGAGCCTGTGCTATGTATCTGCTGCTTGTTCGTTTTTTAGCAAATGTGCTAAAGATCCTTTGTGCTATCAGCATATTGATTTGACAACACTTGTTCCTAAGGTTAACAATGCAGTAGTTGCCACTATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAGCTTGGTGTTGTCCCTGCTACAGTCTGTTCTCCTGGATTTTGTCAACCATTGGTTTCTCCAGTTAGAAAAGCTATGGTAGAGGCGCCTAACTTTTCATGGAATGATAAGAGGTCTCGTCAAGGGAGAGAATCTTCCATTCTTACAAGATGCTGTTTAAACCCTTTAAGCGCGGAGGGTGGTGCACCGGGTGCTCTTTTGAGAAAGTTACACCTGTACAACATTGAGAGAATGGACAACGCATCTCTTTGTTGTGCATTGTCAGCATGCCCTTCTCTCCTTGATCTGGAAATTGTTGGAATCCATGTTGAACTGAGGCAAACTCTAATGTCAGTAAGTGCAAACTGCCACTTGATTGAGCGTTTGTTTTTCGAGTCTTCCAGAACAGGTAGAGATGACAGCTTGAAAATGCAAACCTGTTCTGAGCTAGTAAACAATTGTCCTCATCTAACTTCTTTATCTCTACGAGGGTTTAAGCTACATGATTGTAAAGTTCGCATACTGGTTAAGGGATTTCGGAAACTGAAATATGTTGATTTTTCAACATCTTATTCAATCACTGGGAATTTCTTAAGAAACCTTGGAAACTCCAACGGTGGGAATTTGCTCGAGGTCTTAATTTTAAGGGATTGCATGCATCTCAAAGAGATGGAAGTTGCTAGGATGTTGGCAGCAATTCTTGAAGGAGATTTCAAATTGCTTATACATCTTGACATATCCAATAGGGAAGGCTTGGCATGTGAGGCTGACTGGTATCACAGGTGCTACAACTCTAGCATTATGCCTATTAAGCAGGTTTTGGAAGCAAGGCCTGATATGCGTGTGGTGGCAGAATATCCATCAGAAGGAAGCTATGTCGAGACATTTGATACTGATATGAATAGTGATATAAGTCTCTTATCACAACTTAGCAGCCCCTTATCAGATGGATCAATTTTTATGAGTACATCTGAAGGAAGCTACAATAGCGATCATGGTAGTGGAAATGAGGAAGGACAAGATGCGGTGATTTATGGGGAAAGTTCAGATGAAGACAATATTCTGAGCCTGTAA 1569 0.4264 MDTVEEVEIPIPSSSSSSSSSMAKRPCPSQNPKMEVENLLDEFLSLSDRPSLSLDLSLENLLQSMPPDSDLIDRALRMGSLLLDAAKHSSRKRSSNHNSIVWPFPPDLTFKIFSMLDTQSLCYVSAACSFFSKCAKDPLCYQHIDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPATVCSPGFCQPLVSPVRKAMVEAPNFSWNDKRSRQGRESSILTRCCLNPLSAEGGAPGALLRKLHLYNIERMDNASLCCALSACPSLLDLEIVGIHVELRQTLMSVSANCHLIERLFFESSRTGRDDSLKMQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLKYVDFSTSYSITGNFLRNLGNSNGGNLLEVLILRDCMHLKEMEVARMLAAILEGDFKLLIHLDISNREGLACEADWYHRCYNSSIMPIKQVLEARPDMRVVAEYPSEGSYVETFDTDMNSDISLLSQLSSPLSDGSIFMSTSEGSYNSDHGSGNEEGQDAVIYGESSDEDNILSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03977 522 Gene3D Ribonuclease Inhibitor 100 403 IPR032675 -
Vivi6g03977 522 Pfam F-box-like 105 146 IPR001810 GO:0005515
Vivi6g03977 522 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 104 392 - -
Vivi6g03977 522 MobiDBLite consensus disorder prediction 490 522 - -
Vivi6g03977 522 MobiDBLite consensus disorder prediction 1 32 - -
Vivi6g03977 522 SUPERFAMILY F-box domain 104 150 IPR036047 GO:0005515
Vivi6g03977 522 FunFam F-box protein isoform A 97 398 - -
Vivi6g03977 522 SUPERFAMILY RNI-like 229 414 - -
Vivi6g03977 522 MobiDBLite consensus disorder prediction 9 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03977 K10268 - gmx:100786317 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03977 6 136670374 136676807 Vivi6g03977 6 136670374 136676807 ECH