Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03972 ATGATCAAAAATCAGTTAAAGATCAGATTTTTAAGAAAAAGTTTAGATTTTTCTGCTTTTGGTGATTCTGTCATGAAGGAGTTTCCATCTTGTTTTGGAGAAAATGGTGTGCAGGTTGCAGATTCATCTTCATCTTCATCCTCTTCAGGTTCCACAAGAGGGGCACAGAATGTGGTTACATGTATCTATCAATGTAAATTGAGAGGTCGTTCATGTTTGATTACTGTTTCATGGACAAAGAATCTGATGGGCCAAGGGTTGAGTGTTGGGATTGAGGAATTGGGTAATCATTGTTTGTGTAAGGTTGATATAAAGCCATGGTTGTTTTCAAAGAGAAAAGGGTGTAAGAATTTGGAAGTTGAGTCTAGTAAAATTGCTATACTTTGGGATTTGAGTTATGCTAAATTTGGTTCTGGGCCAGAACCATTGGAAGGGTACTATTTGGTCGTTTTGTTTAACAAAAAGATGGTTTTGCTTTTAGGAGATCTGAAAAAAGAAGCATGCAAGAAGATTGACAGTGACAACAACAATGTTGGTGGTTATAATTCTGATGCAGTTTTTATTGCGAAGAGAGAACATGTTTTCGGCAAGAGATTTTACTCTGCGAAAGCTCAATTTTGTGACAAGGGTAAGATACATGATGTGAGAATTGAGTGTGATACGGTTATGGGGAGTACTGATGATCCTTGTCTTGTGATTAGAATTGATAGCAAGATAGTGATGCAGGTGAAGCAATTGAAGTGGAAGTTTCGCGGTAATCAGACGATTCTGGTGGACAGTTTTCCGGTGGAAGTGTTTTGGGATGTTCATAATTGGCTGTTTGGGAATGTTGCAGGAAATGCTGTTTTCATGTTTCAAACTTGTGTTTCTGCTGAGAAATTGTGGTCTGGTCAATCTGTTTCGGATCCTTCTGTTATGATGACTTGGGCTTATTCTCAGCAGTTTAGAGATTCTCAGTTGCAGGGTCTTGGATTTTCTCTTATTTTGTATGCTTGGAAAAATGAGTAG 1008 0.38 MIKNQLKIRFLRKSLDFSAFGDSVMKEFPSCFGENGVQVADSSSSSSSSGSTRGAQNVVTCIYQCKLRGRSCLITVSWTKNLMGQGLSVGIEELGNHCLCKVDIKPWLFSKRKGCKNLEVESSKIAILWDLSYAKFGSGPEPLEGYYLVVLFNKKMVLLLGDLKKEACKKIDSDNNNVGGYNSDAVFIAKREHVFGKRFYSAKAQFCDKGKIHDVRIECDTVMGSTDDPCLVIRIDSKIVMQVKQLKWKFRGNQTILVDSFPVEVFWDVHNWLFGNVAGNAVFMFQTCVSAEKLWSGQSVSDPSVMMTWAYSQQFRDSQLQGLGFSLILYAWKNE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03972 335 PANTHER EXPRESSED PROTEIN 28 333 IPR008586 -
Vivi6g03972 335 Pfam Plant protein of unknown function (DUF868) 55 333 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03972 Vivi-Chr6 136623824 136625363 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03972 25 335 EF-hand Containing Proteins AT3G04860 58.466 1.23e-123 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03972 - - gmx:100786850 514.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03972 6 136623824 136625363 Vivi6g03972 6 136623824 136625363 ECH