Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03961 ATGTCTGCACTGATTGAAGGACTTCCTGATGCTGTTGCAATAAGGTGTCTTGCACGTGTTCCCTTTTACCTCCACCCAAAGTTAGAGGTTGTCTCTCGTTCTTGGAAAGCAGCCATTCGTAGTCCAGAAATATCAAGAATCCGACAGGAGATTGCTTCATCTGAGGATCTCTTGTGTGTCTGTGCTTTTGATCCAGAGAATGTATGGCAACTGTATGACCCTCTAAGAGATATCTGGATTACCCTTCCTGTTCTTCCCTCAAAGATCAGGCACCTTGCTCACTTTGGTGTCGTATCTGTAGCTGGAAAATTGTTTGTCATTGGCGGTGGAAGTGATGCTGTTGATCCATCGACTGGTGATCACGATGGATGCTTTGCAACCGATGAAGTCTGGTCATATGACCCCATAATCCAACAGTGGGCTCCGCGGGCTTCAATGCTTGTTCCCCGTTCTATGTTTGCATGCTGTGTTTTAAATGGAAAAATTGTTGTCGCCGGGGGATTCACTAGCTGTAGAAAAACAATATCTCAAGCAGAAATATATGACCCCGAGAAGGATTTTTGGACTCCAATCCCTGATCTTCACCGCACACATAATTCAGCCTGTTCTGGAATAGTGATTGGTGGAAAGATGCATGTACTGCACAAGGATATGTCAACGGTGCAAGTTTTAGACAATGCAGGGGCTAGATGGATTGTGGAGGACTGTGATTGGCTTCAAGGTCCAATGGCAGTAGTCCAGGATGCACTTTGTGTTATGAGCAATGGATTTATCATGAAGCAAGACAGAGAAGGGAAAAAGATTATAAGTTCAGCAACAGATTTTAAACAGAGAATTGGGTTTGCAATGATTGGACTAGGCGATGATTTATACATGATTGGGGGCGTCATTGGACCTGACAGATGGAATTGGGACATTAAACCTTTATCGAATGTTGATGTTCTGACACTTGGGAGTGAGAGACCAATTTGGCGCCAAACAGCTCCAATGACACGGTGCCGTGGTACCATTGTTGGTTGTACAATCATGAGAATTTAG 1038 0.4432 MSALIEGLPDAVAIRCLARVPFYLHPKLEVVSRSWKAAIRSPEISRIRQEIASSEDLLCVCAFDPENVWQLYDPLRDIWITLPVLPSKIRHLAHFGVVSVAGKLFVIGGGSDAVDPSTGDHDGCFATDEVWSYDPIIQQWAPRASMLVPRSMFACCVLNGKIVVAGGFTSCRKTISQAEIYDPEKDFWTPIPDLHRTHNSACSGIVIGGKMHVLHKDMSTVQVLDNAGARWIVEDCDWLQGPMAVVQDALCVMSNGFIMKQDREGKKIISSATDFKQRIGFAMIGLGDDLYMIGGVIGPDRWNWDIKPLSNVDVLTLGSERPIWRQTAPMTRCRGTIVGCTIMRI 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03961 345 SUPERFAMILY Kelch motif 61 334 IPR015915 GO:0005515
Vivi6g03961 345 CDD F-box_AtAFR-like 4 48 - -
Vivi6g03961 345 PANTHER OS02G0202900 PROTEIN 3 342 IPR045887 -
Vivi6g03961 345 Gene3D - 62 343 IPR015915 GO:0005515
Vivi6g03961 345 SMART kelc_smart 161 208 IPR006652 GO:0005515
Vivi6g03961 345 SMART kelc_smart 103 160 IPR006652 GO:0005515
Vivi6g03961 345 SMART kelc_smart 289 344 IPR006652 GO:0005515
Vivi6g03961 345 Pfam Kelch motif 149 194 IPR006652 GO:0005515
Vivi6g03961 345 Pfam Kelch motif 92 146 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03961 Vivi-Chr6 136407743 136411327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03961 8 188 Miscellaneous Gene Families AT4G33900 28.421 4.00e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03961 - - cam:101512165 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03961 6 136407743 136411327 Vivi6g03961 6 136407743 136411327 ECH