Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03926 ATGCCTTTCACGATGAAGATTCAGCCGATCGATTCTCAGGTGCCGGCCGAGAGGATTAAGCCGGTTGTGAAGTCGCGGCTGAAGCGGCTCTTTGAGCGTCAGTTCTCAGGCGTTCTGAAGAATCCACCGGTGGAGAAGATCGGCGGCGATGAGCCGCATGCACGCAAGGACGGTAACGGAAACGGAAATGGAATCGTTGAGTTCGAACCAAGCTCGGTGTGTTTGGCGAAGATGGTGCAGAGTTTCATTGAAGAGAATCAAGAGAAACATTCCGTTTCCTGTGCTCGCAATTGCTTCAACGGAAACTTTGACGATACCTCCGACACTGAACTTCACGCGCTCGGTGGTTCTTCTTCCGGTGAAAAGTATGAAACCCTCAAGGATTTGGTGGCGTGTCCAAATGTTTTTGAAAGGAATATGTTAGCGGAGATAACAAAGATAATTGAGAAGAACAAAACTGTGTGCAAACGCAAAGACGATAATTGCAGAAAGACTATAACTGATGGATTGTTAACTCTTGGATACGATGCTTCAATTTGCAAATCTCGCTGGGAAAAATCCACTCTCTGTATTGCCGGGGAATATGAATACATTGATGTGGTAATGGGAAAGGAGAGGGTAATAATTGACGTTGACTTCAGGTCAGAATTTGAGATTGCTCGAGCAACCAAGTCTTACAAAGCGATTCTCCAGACGCTTCCTTACGTATTCGTGGGAAAGTGTGATCGTTTACAGAGTATTGTAGCCATAGCTTCTGAGGCAGCGAAACAGAGTCTAAAGAAAAAGGGATTGCATGTTCCACCATGGAGAAAACTCGAATACGTTCGATCGAAATGGTTATCTCCTTACACAAGAACCACACCACCTCTGTTTTGCAATTGGCCTCGTGAAGAAACTGAGAGAAAACAGAGGGTTTTGATGGGTAGTGGTGAATCTGAAGTGAGATGTGATGAGTCAGAGTCAAAAGTGGTGGTTGAATGGAAGCCACCAGAATTGAAACCCAAAAACTCGCAGACCGGGGTTAAGGTTGTGACTGGTTTGGCAGCTGTTTTTCGTGACAACCCATGA 1068 0.4569 MPFTMKIQPIDSQVPAERIKPVVKSRLKRLFERQFSGVLKNPPVEKIGGDEPHARKDGNGNGNGIVEFEPSSVCLAKMVQSFIEENQEKHSVSCARNCFNGNFDDTSDTELHALGGSSSGEKYETLKDLVACPNVFERNMLAEITKIIEKNKTVCKRKDDNCRKTITDGLLTLGYDASICKSRWEKSTLCIAGEYEYIDVVMGKERVIIDVDFRSEFEIARATKSYKAILQTLPYVFVGKCDRLQSIVAIASEAAKQSLKKKGLHVPPWRKLEYVRSKWLSPYTRTTPPLFCNWPREETERKQRVLMGSGESEVRCDESESKVVVEWKPPELKPKNSQTGVKVVTGLAAVFRDNP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03926 355 Pfam PDDEXK-like family of unknown function 77 285 IPR006502 -
Vivi6g03926 355 PANTHER OS03G0796600 PROTEIN 22 290 IPR006502 -
Vivi6g03926 355 NCBIfam uncharacterized plant-specific domain TIGR01615 163 286 IPR006502 -
Vivi6g03926 355 MobiDBLite consensus disorder prediction 42 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03926 Vivi-Chr6 135557941 135559904 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03926 - - gmx:100796711 435.261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03926 6 135557941 135559904 Vivi6g03926 6 135557941 135559904 ECH
Vivi6g03926 6 135557941 135559904 Vivi1g06483 1 147166068 147168108 PCT