Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03912 CTATATTCTTCTCCAACCCAACATGGCTACATCAATCTCAAACATACTCATAGCCTTTCCCAAAACCGAATCCACTTCCTTCTTCGGATCCAATTCCAACCACCTCAAATCCCAACCACCAAACCTACAAAAACCCTAACACCAAAAAAACTCACCACAAGATGCACCGCAACCCAACAAGTCAACACAATCCCAAACCTTATCAAATCCAAAAACACAAAACTAACCTCAAAACTAACCAAACTCCCAATCGAAAAAGCATGGCGAAAAATCCACGGCGAAGATGATTGGGAAGGACTTCTCGACCCAATGGACCCGATAATCCGATCCGAACTAATCCGTTACGGAGAATTATCCCAAGCATGCTACGACGGTTTCGATTTCGATCCATATTCAAAATATTGCGGCAGTTGCAAACACCATCACGAAGAGTTTTTCCCATCCTTAGACCTTCCTCACATAAAATACAACGTAACACGCTACCTCTACGCCACGGCGAACGTCAACGTCCCAGATTTCTTCAAGAAATCTCGCTGGCCAGATAAATACTGGTCCGAACATGCAAACTGGATGGGTTACATCGCGGTCGCAAACGACGAAGAAACAAAACGGATCGGTCGTAGAGACATCGTGATCGCTTGGCGAGGAACCGTTACGAATGTGGAATGGGTGGCAAATCTTCAAAACTACCTTAAACCTGTTTACAAAGACATTCCTTGTCCCGACAATGATGTTAGAGTAGAAGCAGGATTTCTCGACATGTACACAGATCGACAAAGGAAAGACGGTTATTGTAAATACTCAGCTAGAGAACAGGTTCTAGGCGAGATGAGAAGGTTGTTAGAGAAATACTCTGACGAGGAGGTCAGTATTACCGTAACAGGACATAGCTTAGGAAGTGCTATGGCGACGTTAAGTGCTTATGATATAGCGGAAACAGGGTTGAATGTTAGGGAAGATGGAACAAAGATTCATGTTTCGGTTTTTTCTTTTTCAGGGCCTAGGGTTGGGAATATAAAGTTTAAATGGAGGTTGGAATCGACTTTGGGAGTTAAGGTTTTGAGGGTTCATAATAAGCATGATTTAGTGCCGAAGTCGCCGGGGTTTTTGGTGAATGAGAAATCGCCGGCGTGGTTGTTGAAGATAGCGGAGGATATTGATATTCCATGGTGTTATACACATGTGGGAGTTGATTTGGAGTTGGACCATAAGATTTCGCCATTTTTGATACCTGAAGCAAACGCTGCTTGTGCTCATAACTTGGAGGCTCACTTGCACATACTTGATGGGTACCATGGGAAAAACCGTGAGTATGAAGCAACAACTTATAGAGACATCGCATTGGTGAACAAGGGATGTGATTTTGTGAAAGATGAGTTCTCTGTGCCACCAAAGTGGAGGCAAGAATTGAACAGGAATATGGTGAAGGCTGAAAATGGAAAGTGGATTCTGGCGCAACGACCACAAGTTGTTGACACACATCATGAAAATATTGACTCTTATCTCACGCAATTAGGCATCACTTTACCTAATAAAATCTAG 1542 0.4319 LYSSPTQHGYINLKHTHSLSQNRIHFLLRIQFQPPQIPTTKPTKTLTPKKLTTRCTATQQVNTIPNLIKSKNTKLTSKLTKLPIEKAWRKIHGEDDWEGLLDPMDPIIRSELIRYGELSQACYDGFDFDPYSKYCGSCKHHHEEFFPSLDLPHIKYNVTRYLYATANVNVPDFFKKSRWPDKYWSEHANWMGYIAVANDEETKRIGRRDIVIAWRGTVTNVEWVANLQNYLKPVYKDIPCPDNDVRVEAGFLDMYTDRQRKDGYCKYSAREQVLGEMRRLLEKYSDEEVSITVTGHSLGSAMATLSAYDIAETGLNVREDGTKIHVSVFSFSGPRVGNIKFKWRLESTLGVKVLRVHNKHDLVPKSPGFLVNEKSPAWLLKIAEDIDIPWCYTHVGVDLELDHKISPFLIPEANAACAHNLEAHLHILDGYHGKNREYEATTYRDIALVNKGCDFVKDEFSVPPKWRQELNRNMVKAENGKWILAQRPQVVDTHHENIDSYLTQLGITLPNKI 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03912 513 Gene3D alpha/beta hydrolase 87 497 IPR029058 -
Vivi6g03912 513 FunFam Phospholipase A1-II 3 87 494 - -
Vivi6g03912 513 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 35 488 - -
Vivi6g03912 513 Pfam Lipase (class 3) 211 369 IPR002921 GO:0006629
Vivi6g03912 513 CDD Lipase_3 143 403 - -
Vivi6g03912 513 SUPERFAMILY alpha/beta-Hydrolases 110 431 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03912 Vivi-Chr6 135314087 135317653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03912 84 510 Acyl Lipid Metabolism Gene Families AT2G30550 56.481 2.26e-180 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03912 - - vvo:131610123 1036.17