Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03900 ATGTCTTCTTCTTCGTCAGCACCTCATTACAGTTCCCTCCCTTCATCTTCAAACTCCAAACCTCCAAACTTCATCTCACGCGCCACCGCAACAACAAACCCCGTATTCGTCACGCGCAGACCATGGGAGGAAGTTTTCGCGCTCTACTCATTCACGCGCCCTTACTCAATCAGCGAATCCACTTCGCGCGTGAAGCGTAACCTCAACCACTTCCGCGTTAACTACATCATGATCATCCTCTTCGTCTTGTTCCTCAGTCTCCTATGGCATCCTATCTCGATCATCGTTTTCTTGGTCTCGCTCGTGGCTTGGTTTCTCCTCTACTTCTTCCGTGAAGAACCGATTGTTCTGTTTGGGCGTTCAATTGATGATAGGGTTTCTGCGGAGGTGCTGGCGGTGGTGACTATGGTGGCGTTAGGGTTTACCGGTGTTTGGTTGAACGTGTTGATTTCAGTTGTGGTTGGGGTTTTGGTTGTTGTGTTGCACGCTGCGTTTAGGAGTACGGAAGATTTGTATGTGGATGAACATGAGAGGTATGATGGAGGGTTACTTTCCTTTGCTGCGGGTACCCCTACAAAACGTACTACAGGTCGAAGTTTTAATTAA 606 0.4851 MSSSSSAPHYSSLPSSSNSKPPNFISRATATTNPVFVTRRPWEEVFALYSFTRPYSISESTSRVKRNLNHFRVNYIMIILFVLFLSLLWHPISIIVFLVSLVAWFLLYFFREEPIVLFGRSIDDRVSAEVLAVVTMVALGFTGVWLNVLISVVVGVLVVVLHAAFRSTEDLYVDEHERYDGGLLSFAAGTPTKRTTGRSFN 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03900 201 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 17 177 IPR004895 -
Vivi6g03900 201 Pfam PRA1 family protein 38 175 IPR004895 -
Vivi6g03900 201 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03900 Vivi-Chr6 135130955 135132260 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03900 K20359 - gmx:100794255 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03900 6 135130955 135132260 Vivi6g03900 6 135130955 135132260 ECH