Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03886 ATGAATTCCGACGCTGATTCCGTCGCTAACCCTCCATCATCACCACCGGATAATTCATCACCACCACCACCGCCACCGTCATCGATCCTCATCCCCGGCCTCCCAAACGAAGTTTCCAGAACGATCCTCTCCATGGTACCTTACGCTCATCACGCTCGTCTCAAATCAACTTCCAAATCATGGAAATCCGCACTCTCATCGAAATCATTTCTCAACACACTCTTAGGTCAAAACCGTAACAATCTCATCTGTATCTTCCCTCAAGATCCTTCAATCGCCTCGCCGTATCTCTTCGATGCTAACGCCGTTGCTTGGTGTCCGCTTCCTCCTATGCCGTGTAACCCTCACGTTTACGGTTTGTGTAACTTCGCCGCCGTTGCGTTTGGTCCTCATGTTTACATCATCGGCGGGTCGCTTTTTGACACTCGCTCTTTTCCGATTAACCGCCCGTCGCCGTCTTCCGCGACTTTCCGTTTCAGTTTTCGTGATTTCTCTTGGGAGAGTCGCGCTCCGATGATTTCGCCTCGCGGGAGTTTTGCGTACGCTGTGGTTCCTTCCTCCGGGGAAATTATTGTTGCCGGAGGTGGATCGCGGCATACGGTTTTTGCTGCGGCGGGATCGCGGATTCGGGCGGTGGAGAGGTACGATGTGGTGGAGGATGAGTGGGAGGAATTGGATCCTCTTCCGTGTTTTCGAGCTGGGTGTGTTGGATTTGTGGAGAGGGGAAGGGAGGAGTTTTGGGTTGTTGGTGGTTATAGTGCTTCTAGGACGGTTTCGGGGGTTTTTCCAGTGGATGAGTATTGTAGAGATGCCGCGGTGATGGGATTGGAGGATGGTTCGTGGCGCGAGGTTGGTGATACATGGGGTGATGGGGAGGATGTTAGGGCTGGGAAGATTGTTGTTGGTGATGATAGTGGCTCTCCTTTGGTGTTCATGCTTGATGGGAATGAGATTTTCAGATATGAAATGTCTTCAAACCGTTGGGAATACGAGTCTCGTGTGCCGAAAAAAGCTCCCCTTGGTTCGGCCTTTGGCATTGTAGTAGCATCTGGCGAGCTGTATGTATTGTCGCATTTATATGATGATGATTTTGCTGAAACTCGAAGGTCCAGACCCTATAAGAAGGCAGGAACCATGTGCTTTCAAATCTATAATCCGAAAAAGAAGATGTGGAGAACACTGGTCACAAAATCGCCTTTCACTCGACACATAGACATTACTAGTGCTGTATTGAGCTCAATACGTCTGTGA 1251 0.5004 MNSDADSVANPPSSPPDNSSPPPPPPSSILIPGLPNEVSRTILSMVPYAHHARLKSTSKSWKSALSSKSFLNTLLGQNRNNLICIFPQDPSIASPYLFDANAVAWCPLPPMPCNPHVYGLCNFAAVAFGPHVYIIGGSLFDTRSFPINRPSPSSATFRFSFRDFSWESRAPMISPRGSFAYAVVPSSGEIIVAGGGSRHTVFAAAGSRIRAVERYDVVEDEWEELDPLPCFRAGCVGFVERGREEFWVVGGYSASRTVSGVFPVDEYCRDAAVMGLEDGSWREVGDTWGDGEDVRAGKIVVGDDSGSPLVFMLDGNEIFRYEMSSNRWEYESRVPKKAPLGSAFGIVVASGELYVLSHLYDDDFAETRRSRPYKKAGTMCFQIYNPKKKMWRTLVTKSPFTRHIDITSAVLSSIRL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03886 416 Pfam F-box domain 33 70 IPR001810 GO:0005515
Vivi6g03886 416 ProSiteProfiles F-box domain profile. 28 74 IPR001810 GO:0005515
Vivi6g03886 416 SUPERFAMILY Kelch motif 86 395 IPR015915 GO:0005515
Vivi6g03886 416 Gene3D - 66 410 IPR015915 GO:0005515
Vivi6g03886 416 PANTHER F-BOX/KELCH-REPEAT PROTEIN OR23 26 416 - -
Vivi6g03886 416 MobiDBLite consensus disorder prediction 1 29 - -
Vivi6g03886 416 SUPERFAMILY F-box domain 24 115 IPR036047 GO:0005515
Vivi6g03886 416 SMART kelc_smart 131 186 IPR006652 GO:0005515
Vivi6g03886 416 SMART kelc_smart 189 242 IPR006652 GO:0005515
Vivi6g03886 416 MobiDBLite consensus disorder prediction 14 29 - -
Vivi6g03886 416 Pfam Kelch motif 182 229 IPR006652 GO:0005515
Vivi6g03886 416 Pfam Kelch motif 120 172 IPR006652 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03886 - - cam:101509705 679.093
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03886 6 134800931 134803634 Vivi6g03886 6 134800931 134803634 ECH