Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03881 ATGGCGTTCGCTTCTTTCCTCGGAAGAGTCCTCTTCGCCTCCGTCTTCATCCTCTCTGCTTACCAAGAATTTCATGACTATGGAGTTGATGGGGGACCTGCAGCAAAAGCAATCAGACCGAAATTTGATGCCTTTATTGCTAAAGTTGGTTCACATGTTGGCTTCCAACTTCCAGAAATTGATATAAAATTTTTAGTTGCTGGAGCTATTGCTCTCAAGGGCATTGGAGGGATTCTTTTCATACTCGGCAGTTCGCTTGGAGCTACACTTCTGCTTTTGCATCAGTTGATTACCGCTCCAATATTGTATGATTTCTATAATTACGATACAGAGGACAGAGAATATATTCAACTTTTCATCAAATTTACCCAGAATTTGGCTCTCTTCGGGGCTTTATTGTTTTTTATTGGGATGAAGAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGTTCCCAAAACAAAAACCTACTAG 474 0.4114 MAFASFLGRVLFASVFILSAYQEFHDYGVDGGPAAKAIRPKFDAFIAKVGSHVGFQLPEIDIKFLVAGAIALKGIGGILFILGSSLGATLLLLHQLITAPILYDFYNYDTEDREYIQLFIKFTQNLALFGALLFFIGMKNSIPRRQPKKKVPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03881 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Vivi6g03881 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03881 Vivi-Chr6 134707300 134710028 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03881 - - gmx:100817488 229.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03881 6 134707300 134710028 Vivi6g03881 6 134707300 134710028 ECH
Vivi1g06622 1 152769101 152771089 Vivi6g03881 6 134707300 134710028 PCT