Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03838 ATGTCTTTCAGAGGTCTCAGCCGGCCAAATGCTTCATCTGGCATGGGTGTTGATGAGAACAGCAAGAGTACTTTCATGGAATTGAAGCAGAAGAAGGTTCATCGTTATGTTATCTTTAAGGTTGATGAGAAGAAAAGAGAGGTTGTAGTTGAGAAGACTGGTGGTCCTGCTGAGAGCTATGATGATTTTGCTGCTTCTTTGCCTGAGAATGATTGCAGATATGCTGTGTTTGATTATGATTTTGTTACTTCTGAGAATTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACTTCTCGAATCCGCGCCAAGATGCTCTATGCCACAACTAAAGAAAGGTTTAGACGCGAGCTAGATGGTGTCCATTATGAAATCCAAGCCACTGATCCCACAGAAATGGATCTTGAGGTGCTGAGGGACCGAGCACATTGA 441 0.4286 MSFRGLSRPNASSGMGVDENSKSTFMELKQKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDYDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKERFRRELDGVHYEIQATDPTEMDLEVLRDRAH 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03838 146 SMART adf_2 19 146 IPR002108 GO:0003779
Vivi6g03838 146 PANTHER COFILIN-RELATED 10 145 IPR017904 GO:0015629|GO:0030042
Vivi6g03838 146 FunFam Actin-depolymerizing factor 2 8 146 - -
Vivi6g03838 146 SUPERFAMILY Actin depolymerizing proteins 11 146 - -
Vivi6g03838 146 ProSiteProfiles ADF-H domain profile. 12 146 IPR002108 GO:0003779
Vivi6g03838 146 Gene3D Severin 10 146 IPR029006 -
Vivi6g03838 146 Pfam Cofilin/tropomyosin-type actin-binding protein 22 143 IPR002108 GO:0003779
Vivi6g03838 146 CDD ADF_cofilin_like 13 145 IPR017904 GO:0015629|GO:0030042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03838 Vivi-Chr6 134060644 134063134 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03838 K05765 - gmx:100819975 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03838 6 134060644 134063134 Vivi6g03838 6 134060644 134063134 ECH