Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03808 ATGGCTTCTGCAATTACTCATCGCGACGAAGAAACTCCTTTGGTTGTTACCGATGAATCACCGCTTCAACTTCAACCGCATAAAAGCCATAGCAGAGATGTTCATATTTTGAGCTTAGCGTTTTTATTGATATTTCTTGCTTATGGTGCTGCTCAAAATTTACAGAGCACTCTCAATACTGAGGAGGATTTGGGTACGACTTCGCTTGGGATATTATATTTGTCGTTTACGTTTTTTTCTGTGTTTGCTTCTTTGGTGGTGCGGATTCTTGGATCTAAGAATGCTTTGATTATTGGAACTTCTGGTTATTGGCTCTATGTCGCTGCCAATTTGAAGCCCAATTGGTATACACTGGTTCCAGCTTCTGTGTATCTTGGGTTTTGTGCTTCTATAATATGGGTTGGTCAGGGAACATATCTAACTTCCACTGCACGCAGACATGCTATAGATAACAATTTACTCGAAGGTGCAGTAATTGGTGACTTCAATGGGGAATTCTGGGGTGCCTTCGCGCTTCATCAGTTTATTGGAAATCTTATTACATTTGCTCTACTCAGTGATGGCCAGGGGGGAAGTACCAAAGGCACAACTTTATTGTTTGTTGTATTCGTTTTCGTTATGACCTTTGGTGCAATACTAATGTGCTTCCTGCATAAACGGAGTGGTAATAGTAAGAAAGGATACGAGCATTTAGAAGCTGCTGATGCTGGTGAATCAAAGTCACTTAAGTCTCTATGTCGATCACTCACAAGTGCATTGTCTGATGTGAAGATGTTGTTGATCATACCCCTTATAGCATATTCAGGTCTACAACAAGCATTTGTATGGGCGGAATTTACCAAGTACGTTGTAACTCCAGCAATTGGTGTTTCCGGTGTTGGTATTTCAATGGCAGCATATGGAGCTTTTGATGGAATATGTTCTCTGGCCGCTGGTCGTCTCACCTCTGGCCTCACATCCATTACATCAATAGTTTCTTTTGGAGCTTTTGCTCAGGCGGTTGTACTAATTTTACTTCTGCTAAATTTCAGCATATCTAGCGGATTTCTCGGTACTTTATATATACTATTTTTGGCTGCTTTATTGGGCATCGGTGATGGAGTTCTAATGACGCAGCTCAATGCTTTGCTAGGAATGCTATTTAAGCATGACATGGAAGGGGCTTTTGCACAGCTAAAGATATGGCAAAGCGCTACAATTGCTATCATGTTCTTTGCGGCCCCGTACATTTCATTCCAAGCAGTTACCATAGTCATGTTGGTTCTATTATGCTTGTCATTCTGCAGTTTTCTATGGTTGGCTCTCAAGGTGGGGAATGCATCATCACTCTCCACCAGTGAGTGA 1344 0.4159 MASAITHRDEETPLVVTDESPLQLQPHKSHSRDVHILSLAFLLIFLAYGAAQNLQSTLNTEEDLGTTSLGILYLSFTFFSVFASLVVRILGSKNALIIGTSGYWLYVAANLKPNWYTLVPASVYLGFCASIIWVGQGTYLTSTARRHAIDNNLLEGAVIGDFNGEFWGAFALHQFIGNLITFALLSDGQGGSTKGTTLLFVVFVFVMTFGAILMCFLHKRSGNSKKGYEHLEAADAGESKSLKSLCRSLTSALSDVKMLLIIPLIAYSGLQQAFVWAEFTKYVVTPAIGVSGVGISMAAYGAFDGICSLAAGRLTSGLTSITSIVSFGAFAQAVVLILLLLNFSISSGFLGTLYILFLAALLGIGDGVLMTQLNALLGMLFKHDMEGAFAQLKIWQSATIAIMFFAAPYISFQAVTIVMLVLLCLSFCSFLWLALKVGNASSLSTSE 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03808 447 Gene3D MFS general substrate transporter like domains 27 229 IPR036259 -
Vivi6g03808 447 Pfam Ion channel regulatory protein UNC-93 64 431 IPR010291 -
Vivi6g03808 447 PANTHER UNC-93 RELATED 18 440 - -
Vivi6g03808 447 SUPERFAMILY MFS general substrate transporter 19 434 IPR036259 -
Vivi6g03808 447 CDD MFS_unc93_like 34 436 IPR044771 GO:0055075
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03808 Vivi-Chr6 133488021 133490904 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03808 - - gmx:100802740 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03808 6 133488021 133490904 Vivi6g03808 6 133488021 133490904 ECH