Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03770 ATGACGGAGGCGAATCATTGGTTTTCGCCTCCGTCTCTCACCGCACTCTGCATCGATCATCTCAAACGGAAACTCGTCCTTGGGGATGATGCTGTTGTTTCCATTCTTCCTGATATTTACGAACTTCCTTCGCATTTAATCGAGGATTTAATCTCGAGTTTACCTCCTATCGGATTGTACAATTTTCAACTTCACTTGCCATTCCAGGATCTGACTAAGGAAGATTTTTTGCACGATGACTCAACAAATAAAAAGAGAAAACGTTCCAGGGATTGGAATCTAAATACAGCATGGCAGAAGAAGTTTGAGTTGCGATGGCCTAATCTCATTAATCAGATCCAACCAACCGACTGGCAGAAAGTATACTGGGAGACCCATCTGCAAAAGTGTCTGGATGACGCAACAGAGAAAGCAATACTCTCATCTTTTATAGGACGTATTGGCGACATACAGGTTTTAGACAGCTCACTGAACGATATTGGTTTGGTGGGACTTACAATTCAGTCATATCGTAAATATTCAAAACTTTCTTACCATTGCCTACAATTTGGCAGCCATGTGAGTTGTCTGATACTACAAAATGTTATGTGCAATACAGAAACTACTCGCTTGTTGAGGGAATGCAAGCTGGAGAGTCTTGTGCTAAGATGTATCCGATCTAAGGAACAAGTTGTTGGATTATGCAAACTTATCTCTCAAAATAGCAGAACATTAACGTCGCTGGAGTTTATTCACTGCACAGTCTACATAGATTTTATTAATGCAATACTTGATTCTGTTGTCTCAAAGGGTGTAGAAAAACATGGGATCAAACACCTCTCAATCGTCTCCTCGAGTTTTGGACAAGGCACTTTTTCTTTACCCAGTGGGCTTGAATCATTTGTGTCTTCAGCAAGGTCCCTGTGCTCATTAAAACTATTTGACAGTCACCTTGGACGGAATTTTGCAAAAGCTCTTTTCATGACTCTTCTCAATGTTTCCTCTAGCATATCTGTCCTTGACCTTTCTGAGAATGATATAGCAGGATGCTTTTCTTACCTTAACAGGAGACTATCAATTGGCTCTCATTTGGCTGTTGGAATTGGAAAGTCTTTACAACTATTGCGCGTACTCAACCTGAGGGGGAACAATTTACGGAAAGAGGATGCAGAAAGTCTTAGATATGCTCTTGCATACATGTCTAACTTGGAGGACCTAGATATAAGTGACAATCCAATTGAAGATGAAGGAATCAGGCATTTAATCCCATATTTTGCTGGAACATGCTGCCGTGTGACTTCTTTGAAACTAGAGGCTTGTGACTTGTCCCACGATGGAGTTAATCGTTTTCTTGATTCCTTTTCTCCCCTCAATTCACCATTGAAGTCTCTTTGCATTGCTGAAAATTACCTTGGAAGCAAGGTAGCAGGAGCTTTGGGAAGATTTTTTAGCACGTCGATTGAAGTACTAGATGCTGCAGGCATTGATTTGCATCCCACTGGTTTTCAAGAGCTTCAAAGTACACTGATAACAACGGAGAAGCTTAAGTTGGTGAAAATTAATATAAGCAAAAACCGTGGTGGGATTGAAACTGCTCATTTTTTGTCAAAACTCTTGTTACAGACTCCAGAACTAGTTGATGTAAATGCATCAAATAATTCTATGCCTATTGAATCACTGCCCATCATCTCTTCTGCATTAAAACTTGCAAAAGGTAAGGTTCAACATTTGGACTTGACCGGACATAGATGGGACTACAAGCCAGAGCATGCTTCTCTACTCGCTGAATTTGTCTATAATGGAAAATCTATATTGATTCTTCCATTATTATTAGCCACTGCCGCTCCTTATGACCATGATCCTTAG 1845 0.4033 MTEANHWFSPPSLTALCIDHLKRKLVLGDDAVVSILPDIYELPSHLIEDLISSLPPIGLYNFQLHLPFQDLTKEDFLHDDSTNKKRKRSRDWNLNTAWQKKFELRWPNLINQIQPTDWQKVYWETHLQKCLDDATEKAILSSFIGRIGDIQVLDSSLNDIGLVGLTIQSYRKYSKLSYHCLQFGSHVSCLILQNVMCNTETTRLLRECKLESLVLRCIRSKEQVVGLCKLISQNSRTLTSLEFIHCTVYIDFINAILDSVVSKGVEKHGIKHLSIVSSSFGQGTFSLPSGLESFVSSARSLCSLKLFDSHLGRNFAKALFMTLLNVSSSISVLDLSENDIAGCFSYLNRRLSIGSHLAVGIGKSLQLLRVLNLRGNNLRKEDAESLRYALAYMSNLEDLDISDNPIEDEGIRHLIPYFAGTCCRVTSLKLEACDLSHDGVNRFLDSFSPLNSPLKSLCIAENYLGSKVAGALGRFFSTSIEVLDAAGIDLHPTGFQELQSTLITTEKLKLVKINISKNRGGIETAHFLSKLLLQTPELVDVNASNNSMPIESLPIISSALKLAKGKVQHLDLTGHRWDYKPEHASLLAEFVYNGKSILILPLLLATAAPYDHDP 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03770 614 Pfam Leucine Rich repeat 366 386 IPR001611 GO:0005515
Vivi6g03770 614 Pfam Leucine Rich repeat 394 414 IPR001611 GO:0005515
Vivi6g03770 614 Gene3D Ribonuclease Inhibitor 104 348 IPR032675 -
Vivi6g03770 614 SMART LRR_RI_2 365 392 - -
Vivi6g03770 614 SMART LRR_RI_2 393 420 - -
Vivi6g03770 614 SMART LRR_RI_2 507 534 - -
Vivi6g03770 614 PANTHER RNI-LIKE SUPERFAMILY PROTEIN 10 614 - -
Vivi6g03770 614 Gene3D Ribonuclease Inhibitor 349 600 IPR032675 -
Vivi6g03770 614 SUPERFAMILY RNI-like 186 580 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03770 - - mtr:11441496 824.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03770 6 132812649 132827054 Vivi6g03770 6 132812649 132827054 ECH