Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03748 ATGGCTGATTTAGATGATTGGCTTCTGGAGGCTGCTGGGGTAAACAGACATTCTCCCCCGACTAGGAGGGATGGAGAACCTTTGGATGGTGGGAGTGATTCTGATTCGGATTCCGATTCTGATGATGAGCGTGATTATCGGGAGAGAAAGACGGCTCAGGTTCCTCTAAAGAAGAGAGGGAGAGAAGATGATAGTGATGATGATGTTGAAGATGGTCGTTCTGTGCGTGAGGGGGACAGCAGTGATGGCTCTGATGTTGGTGATGATCTTTATAAGGATGAGGATGATAGACAGAAACTTTCTGAGATGACTGAACTTCAAAGAGAGATGATTTTGTCGGAAAGGGCTAATAAGAAAGATGATAAGGATTTTTTGGGTAAGATGGCATTGAAGCGCGAGAAGGGGAAAATGGCAACTGTATCTAGAAGAGAGTCTCCGCCTCTTCCGTCTTCTCGTGTGCGGTCGTCTGCTAGATCTGCTGATAGGTCAGCTGCGAAGGACGGTGCGTTAAATGAACTGCGTGCTAAAAGGTTGAAACAGCAAGATTCAGATGTGAAACATAAGGTGAAAGAGGGGTCTAAAAGTGCGGGAACGGGGATTTATTCGCAGAAAAGGAGACCTTACTTCAGTGGTTCAAGCCGTAGCGGAAGTGAGAGTAGGTCCCATAGTGATGATGAAGATTCGGATGGAGATGGAGGGATTATTGACAGCGATGATGATGATAAGATAACTTCTGAAAAGCCTTCTTTTGAAGACATACAGGAAATCACCATTCGAAGGTCAAAACTTGCAAAATGGTTAATGGAACCATTTTTCGAGGAGTTAATTGTAGGTTGTTTGGTAAGGGTTGGTATTGGTAGGTCAAAGAATGGACCTATCTACAGACTCTGCGTTGTGAAAAATGTGGATGCATCAGATCCAGACCGGGTGTATAAATTAGATAACAAAACCACTTACAAGTACTTGAATATTGTATGGGGAAATGATTCTTCTGCTGCTAGGTGGCAAATGGCTATGATTAGCGATTCTCCCCCTCTTGAGGAGGAGTTTAAACAGTGGGTTAAGGAAGTAGAGCGTAGTGGTGGCCGGATGCTGACAAAGCTAGATGTGTCTGAAAAAAAGCAAGCCATTCAGAAGATCAATAGTTTTGTTTACTCAGCAGCTACTGTGAAGCAGATGTTAGAAGAAAAAAAATCTACCTCGTGGAGGCCTTCAAATGTCGCAGCCGAGAAGGACCGGTTGAGAACAGAGTTGGAAATAGCACAAAGCAAGAATGATGCAGCCGGAGCAGAGAAGATCAGGACAAGACTACAAGAATTGGAAGATTCACGGAAAGCTGAGGAGAAGGATGCCAAGGCTTTGAGGCTTTCTGAGATGAACAGAAAGAACAGGTTTGAGAACTTCAAAAATGCATCTGAATTGAGGCCAGTAAATAAAGCTTTGAAAGCAGGGGAGGCAGGTTATGATCCCTTTTCAAGGAGATGGACTAGATCAAGAAACTACTATAATTCAAAACAGGTTGAAGAGGCTGCAGCTGGAAATAATAGTTCTGGTGATGCAGTTGGTGATAGAGGCAGCAATGGGACGGGAGCAGGCATGGTGGCCACTGCTGAAGCTTTGGAAGCTGCTGCTGATGCTGGAAAATTAATCGACACAAGGGCTCCAGTGGACCAAGGGACGGAGTCAAATGTACTGCACAATTTTGAGCTGCCAATATCATTAGCCATACTACAAAAGTTTGGTGGAGCACAAGGAGTTCAGGCAGGGTTTATGGCAAAAAAACAGAGGATTGAAGGAATTGTTGGATTTCGAGTCCCAGAAAACGATGGAAGGAGTCATCAGTTGACATTAACAGTTAGTGATTACAAAAGAAGAAGAGGGATTTTTTGA 1890 0.4407 MADLDDWLLEAAGVNRHSPPTRRDGEPLDGGSDSDSDSDSDDERDYRERKTAQVPLKKRGREDDSDDDVEDGRSVREGDSSDGSDVGDDLYKDEDDRQKLSEMTELQREMILSERANKKDDKDFLGKMALKREKGKMATVSRRESPPLPSSRVRSSARSADRSAAKDGALNELRAKRLKQQDSDVKHKVKEGSKSAGTGIYSQKRRPYFSGSSRSGSESRSHSDDEDSDGDGGIIDSDDDDKITSEKPSFEDIQEITIRRSKLAKWLMEPFFEELIVGCLVRVGIGRSKNGPIYRLCVVKNVDASDPDRVYKLDNKTTYKYLNIVWGNDSSAARWQMAMISDSPPLEEEFKQWVKEVERSGGRMLTKLDVSEKKQAIQKINSFVYSAATVKQMLEEKKSTSWRPSNVAAEKDRLRTELEIAQSKNDAAGAEKIRTRLQELEDSRKAEEKDAKALRLSEMNRKNRFENFKNASELRPVNKALKAGEAGYDPFSRRWTRSRNYYNSKQVEEAAAGNNSSGDAVGDRGSNGTGAGMVATAEALEAAADAGKLIDTRAPVDQGTESNVLHNFELPISLAILQKFGGAQGVQAGFMAKKQRIEGIVGFRVPENDGRSHQLTLTVSDYKRRRGIF 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03748 629 MobiDBLite consensus disorder prediction 508 527 - -
Vivi6g03748 629 MobiDBLite consensus disorder prediction 42 140 - -
Vivi6g03748 629 PANTHER UNCHARACTERIZED 34 627 - -
Vivi6g03748 629 MobiDBLite consensus disorder prediction 159 193 - -
Vivi6g03748 629 SUPERFAMILY Plus3-like 249 379 IPR036128 GO:0003677
Vivi6g03748 629 Pfam Plus-3 domain 252 357 IPR004343 GO:0003677
Vivi6g03748 629 Gene3D - 248 380 IPR036128 GO:0003677
Vivi6g03748 629 MobiDBLite consensus disorder prediction 1 248 - -
Vivi6g03748 629 MobiDBLite consensus disorder prediction 144 158 - -
Vivi6g03748 629 Coils Coil 411 457 - -
Vivi6g03748 629 ProSiteProfiles Plus3 domain profile. 247 382 IPR004343 GO:0003677
Vivi6g03748 629 MobiDBLite consensus disorder prediction 196 217 - -
Vivi6g03748 629 MobiDBLite consensus disorder prediction 508 523 - -
Vivi6g03748 629 FunFam RNA polymerase-associated protein RTF1 248 380 - -
Vivi6g03748 629 SMART rtf1 247 359 IPR004343 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03748 Vivi-Chr6 132509568 132512043 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03748 K15178 - gmx:100818650 756.518