Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03746 ATGAGCAATGAGCATGAGATAGGTGTAGAAAACATGGATGCAAAAGAAGAAGGAGAACCTAATGAGGATAGGCCCACATCTCCAATGTGGGTTCTACAACAGATATCTGAAGGAGCCTTTAGAGTTGCGGGGGAAGCATTGCAAAATATGTATTCTGGTGGTGGATCAAACGTGCCTCAAGTAGGGCCTAGTGTTGCACATAGGAGAAGCCAGAGTGAACTTGTGACTAAAGATTTTCAACGTAGTAATAGTTTTCAGAAGTTAAAAGCTCATGTGCATAAGGCGTGGTGGGGAGGAAAATCGAGGGAAGAAGGTTTGCTAGCGAGTTTCAATCCCGAGGTCATGGCGAACCAGAAACGTCAGTGGTATCAGCTTCATCCCAAATCTATGGATTGTATGAATTATAAGGAGCCAACCTCGCTCTTTGAACATTTTGTGGTTGTGGGACTGCATCCAGATGCTAATTTGGAAGTCGTGGAGCACGCATTTGCAAGAAGGAAGAAATGGGAAAGAGAGACGGAAAACGATGAAAATCTAGACTACAGAATACCGCAGCAACAAAGGCCGCCAGAACCAACTTTGGAACCTCAGATATTGTTCAAATATCCTTCTGCGAAGAGGATGACAGTGCGTTTGAAAGATTTAGCCTCCTTTTGCTTTCCGGGAGGTGTTAGGGCAGGGTTGTTGGAGAGGACTCCATCTCTAAGTGAGCTAAACGAGCTAGTCTATGGACAGCATTTGGGAAGAGATGATCTATCGTTTATCTTTACACTCAAGGCAGCAGACAGTACAACACTTTATGGAGTTTGCTTACATGTGCCTGAAATTGTTCAGAGGCCCCCTGGTATTTTAGGCACATCTTCTCCTTCTTCTTTTCCCTCTGGGTTATGCAGCCGTTTTCTGGTTTCCGCACCTCGCTGTTACTGTCTTCTGACTAAAATTCCTTTCTTTGAGTTACACTTTGAGATGTTAAACAGTCTTATTGCACAGGAGCGTCTGAACCGGATTACTCAGTTTGTAAATGAGATTACTCTCTCTGGTTGCATTCCATCGACGCCCAAACTAGATGACCAATTGAGTTCATCTACTAACTCCCCAGAGAGGCAGTCGTTTAGTGACTGGATGGCTTGTGCAATACCTCTTGAGGGTGCAGCAGTCATTACCGCTGCTGCTGCTGGACTTATATCTGATGATGAAATCCCACAATTATCACCCAAAATATGGGATTCTCGCTGTCAATCCCCTATTAGTGTGACTGCTAGTGATGCCTCAGATTGTTGTCAGTATAGGGATATAGATAAAGATGGCAAGAAGAATCTGCAAGATCATGATACATGTGCTTTTGAGGGACCAGAAGCTCATGATTCTGTGGAAAGAATGCATGGAAATTCTGAAGGTGGCCAAGTTTCTTCCAGTGTTGGAACACCTGTATCTCCTCAGGGTCGCACCTTGGAGCGTCTTGGAAGTTCTGAGTCACTTTTCAGTCCAGTTAGAAGCATTGTGTCCGAAGATGATGATCCTCCTTTTTCAAACAATGAAATCGATAACGGAGATGAGTTGTTGATGGAATGGGCTATGGAGCATAAGAATGATTTACTACAGATAGTGTGCAGATATCATGCTCAAGCTATTCCACCTCGAGGAAGTGAATTTGTCTTCCACCCTCTTGAACATTTACAAGCTATTCAATATATACGACATTCAGTTGCTTCTCTTGGCTTCAAAGAAAATTGTTTAGATTGTTCTGAACCAACTGAGGTCATTGCAAAGTTGGCAGCTGCTGAGGAAGCCCTTTCATTATCAGTATGGACAACTTCAACTACTTGTCGAGTTCTATCCCTTGATAGTTTGCTGGCATTAGTTACAGGAGTGTTGTTGGAAAAACAGGTTGTAATAGTGTGCCCAAATTTGGGTGTTCTATCTGCAGTAGTGCTTTCTCTAATACCCATGATTCGTCCATTTCAGTGGCAGAGTTTACTGCTTCCGGTTTTGCCAGCAAAAATGATTGATTTTCTTGACGCCCCAGTTCCATATATTGTTGGCATACAACATAAACCAGATGATTTGTATATTAAAACAAGTAATCTTGTTGAAGTAGACGTACTGGAAAATCAGGTTAAAATGTGTCATTTGCCTAGACTTCCACGGCAAAGGGATCTTGTTTCTCAGTTGACTCCAATTCATGCCAGACTTTCAAGTGAAAGTGCAGTTGCTAAAAAGCATCCTATACATAGGTGCAACGAAATCCAGGCCGAAATTGCAACTCAGTTTTTGAATGTCGTGTGGCACTATTTGGAGTCACTTTGTTCGAATTTGAAATCGCATACGATAACTAGTGTACAATCGAATCACGACAGGGTTTCTTTACTTCTTAAAGACACCTTCATCGACTCCTTTCCTCTGAGGGACCAGCCATTCATTAAGCTTTTTGTAGATACACAGCTATTCACTGTTTTATCAGACTCTTATCTATCGAGCTTTGAGAGCGGCAAATCATAG 2499 0.4254 MSNEHEIGVENMDAKEEGEPNEDRPTSPMWVLQQISEGAFRVAGEALQNMYSGGGSNVPQVGPSVAHRRSQSELVTKDFQRSNSFQKLKAHVHKAWWGGKSREEGLLASFNPEVMANQKRQWYQLHPKSMDCMNYKEPTSLFEHFVVVGLHPDANLEVVEHAFARRKKWERETENDENLDYRIPQQQRPPEPTLEPQILFKYPSAKRMTVRLKDLASFCFPGGVRAGLLERTPSLSELNELVYGQHLGRDDLSFIFTLKAADSTTLYGVCLHVPEIVQRPPGILGTSSPSSFPSGLCSRFLVSAPRCYCLLTKIPFFELHFEMLNSLIAQERLNRITQFVNEITLSGCIPSTPKLDDQLSSSTNSPERQSFSDWMACAIPLEGAAVITAAAAGLISDDEIPQLSPKIWDSRCQSPISVTASDASDCCQYRDIDKDGKKNLQDHDTCAFEGPEAHDSVERMHGNSEGGQVSSSVGTPVSPQGRTLERLGSSESLFSPVRSIVSEDDDPPFSNNEIDNGDELLMEWAMEHKNDLLQIVCRYHAQAIPPRGSEFVFHPLEHLQAIQYIRHSVASLGFKENCLDCSEPTEVIAKLAAAEEALSLSVWTTSTTCRVLSLDSLLALVTGVLLEKQVVIVCPNLGVLSAVVLSLIPMIRPFQWQSLLLPVLPAKMIDFLDAPVPYIVGIQHKPDDLYIKTSNLVEVDVLENQVKMCHLPRLPRQRDLVSQLTPIHARLSSESAVAKKHPIHRCNEIQAEIATQFLNVVWHYLESLCSNLKSHTITSVQSNHDRVSLLLKDTFIDSFPLRDQPFIKLFVDTQLFTVLSDSYLSSFESGKS 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03746 832 Pfam DENN (AEX-3) domain 607 701 IPR001194 -
Vivi6g03746 832 SMART uDENN_cls 138 274 IPR005113 -
Vivi6g03746 832 MobiDBLite consensus disorder prediction 457 488 - -
Vivi6g03746 832 MobiDBLite consensus disorder prediction 463 488 - -
Vivi6g03746 832 Pfam uDENN domain 196 273 IPR005113 -
Vivi6g03746 832 PANTHER DENN DOMAIN-CONTAINING PROTEIN 2 68 827 - -
Vivi6g03746 832 MobiDBLite consensus disorder prediction 1 27 - -
Vivi6g03746 832 Gene3D - 129 351 - -
Vivi6g03746 832 ProSiteProfiles Tripartite DENN domain profile. 180 832 IPR037516 -
Vivi6g03746 832 SMART DENN_cls 303 704 IPR001194 -
Vivi6g03746 832 MobiDBLite consensus disorder prediction 1 23 - -
Vivi6g03746 832 Gene3D - 601 766 IPR043153 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03746 Vivi-Chr6 132495325 132503420 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03746 - - gmx:100791254 1323.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03746 6 132495325 132503420 Vivi6g03746 6 132495325 132503420 ECH