Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03736 ATGGAGGAGAGTGAGCAGACTAGTTTAAAGTGGGCTGCAATTCAGAGCCTTCCAACGGTTGCACGTTTGAGAAGAGGTTTACTGACTACTCCTAATGGAGAGTCCAATGAAATTGATGTACACAATATTGGATTGCAAGAAAGAACTTATTTGCTTCAAAGACTCGTCACTCACGATGTAGACACTGATGACAGTTTCTTGTTGAAGCTCATGAGAGATCGCTATGATAGAGCTGGAGTTGGTATTCCTACAATTGAAGTTCGATTTCAAGATTTGAATGTCCAAGCACAGGTTCAGTTAGGGAAGAGAGCTTTTCCTACAATCACTAACTACATGCTTGACATGCTAGAGGCACCGTTGAAATATGTATTAAAAAGAAGAAAACAAGACTTGAATATTCTACAGGATGTCAGTGGAATTATAAAGCATAGCAGGATGACCTTGCTTTTGGGTCCTCCAAGTTCTGGAAAGACAACGCTCCTCTTGGCCTTGGCTGGAAAACTTGATCCCAATTTAAAGTTTACTGGAAAGGTGACATACAACGGTCATGAGATGAATGAATTTGTACCCCAAAGAACTGCTGTTTATGTCGATCAAAATGATGTTCACTTTGGAGAATTGACTGTTAGAGAAACCTTGGCCTTCTCAGCAAGAGTTCAAGGAGTTGGACCCAGATATGATATTCTAGAAGAAGTGTGTAGAAAAGAGGAAGAGGAAAACATAATTCCTGATCCAGATATCGATGTCTATATGAAGACTGTTGCAACTGAGGACCAGAGAGCAAATGTTATAACAGATTATATTTTAAAGATTTTGGGACTCGATAACTGTGGAGATTCAATGTTAAGAGGAGAGATGCTGGTAGGACCAATTAAAGCTTATTTCATGGATGAAATATCGAATGGTTTGGATGACTCAACAACCTTTCAAATTGTGAAATCACTGAAACAATTTGTTTGCCTTCTCAAAAGAACTGCTATGATCTCACTACAACAGCCATCACTAGAGACATATAATCTTTTTGATGACATTATTTTACTCTCTGATGGACACATTGTGTACCACGGTCCTTGTGAACAAGTGCTTGATTTTTTTTCTTCAATGGGTTTTCTATGTCCTGAGAGGAAATCTGTTATAGACTTTTTACAAGAAGTGACATCAGTGAAAGATCAGGAACAATATTGGGTACAAAATGAAAAGCCTTATAGATTTGTGACGGCTGAAGAGTTTGCAGAGGCATTTGAAACATCTCATAATGGGAGAAGGCTTGGTAATGAACTTGCTACTCAATTTGACAAGTCAAAAAGCCATCCAGGTGCTTTAACATCCAACAAGTATGGAATTGCAAAGAGGGAGTTGTTCAAAATTTGCTTATCAAGAGAGTATTTACTCATAAAGCGCAATTCATTTTACTATATCTTGAAACTTTTACAAATTGCTTTGGTTGCTGTCATCACCATGACCGTTTTCCTACCGACTCAAATGCACCATGATTCAGTGTCCGATGGAGGCATATATGCTGGCGCATTGTTCTATGGGAGTTTGGTAATTCTGTTGAATGGATTTGCTGAACTTTCTATGATGGTTGGGAGACTTCCTGTGTTTTACAAGCAAAGAGACTTACTCTTTTTCCCTTCATGGGCATATGCTCTTCCTTCGTGGATCCTAAAAGTTCCCATAAATTTTGCAGAAGTGGGTATTTGGGTATTCTTCACCTATTCTGTCATTGGTGATCCAAATGTTATTGGAAGGACATTCCTTCTTCTAGTTCTTGCCAGCCAAATGGCTAATGTATTTTGCCGATTAGTTGCTGCAATCGGTAGAGAAATGTCAATGGCCGGCACACTTGGGTTGTTTTCATTGGCAATGCTTGTTGTTGTGGTGTCAAAAGACAATATAAAAAAGTGGTGGTTATGCGAATTCTGGATATCTCCTACGATGTATGGACAGAATGCCTTGTTGAGTAACGAGTTTCATGGGAAAACATGGAGACATGTTCTACCTAACTCAACGGAACCTCTAGGAGTTCAAGTTTTGAAATCTCGTGGGTTCTTTACCCAGTCCTACTGGTATTGGATTGGTTTTGGTGCATTGATTGGATACACATTACTATTCATCATTGGTAACATTCTTGCTCTCACTTTCTTAAACCCACTTAAAGAACATCAGGTTGTTAAATCAATTTGGTCGTTGTCTAGGACGAAACAATCTGTAATGGACAGTGAACATAACAGGAAGAGTGTAATGATTCTTCCTTTTGAACCACACTGTATCACCTTTGTCGACTTGACATATTCAGTCAATATGCCACAGTCGCAGGAAAAGATCAATCAAGGAGTTACTGGGGATAGGTTGAACCTTTTGAAGGACGTCAATGGAGCTTTCAGACCGGGTGTTCTCACAGCACTAATGTGTGTCAATGGTGCTGGCAAAACAACTCTAATGGATGTACTGACTGGAAGAAAGACCAAAGGATATATTAGTGGGAACATCACAATTTCTGGCTATCCGAAGAAGCAGGACAGCTTTACTAGAATTTGTGGATATTGTGATCAAAATGATATCCACTCTCCTTATGTTACCGTTTATGAATCACTGCTCTTTTCAGCTTGGCTCAGATTGTCTGCAGAAATCAACGACGAAACCAGGAAGATGTTTATTGAGGAAGTTATGGAGCTTGTGGAACTTACCACACTGAAGGATGCAATTGTTGGATTGCCTGGTGCTAATGGTCTCTCGACACAACAGCGCAAAAGGTTGACTATCGCAGTTGAGTTACTGGCTAATCCTTCTATAATATTCATGGACGATCCAACTTCTGGACTAGATGCAACATCTGTCTCTATCGTTATGAGAGTAATTAGGACTTTAGTGGACAATAGAAGAACAATTGTCTGTGCCATTCATCAACCCAAAGTTGATATATTTGAATATTTTGATGAGTTGTTCTTGATGAAGCAAGGAGGGCAAGTGATATATGCGGGGCCAATTGGACATCATTCTTCCCATTTAATAAGTTACTTCGAGGGGATTCAAGGTGTCAGTAAGATTAAAGATGGTTGTAACTCAGCAACTTGGATGCTGGAAGTCACTTCTTCAGTAAAAGAAATGGAATTGGGGATTGATTTTGCTGAGGTGTACAAAAACTCTGAATTACACAGGAGAAACAAAGCTCTTATAGCAGAACTGAGCGTTCCGGCTCCTGATTCGGAGGATCTTCTCTTTCCTTCAAAGTACTCAAGACCCCTTTTCACGCAATGCAAGGCTTGCTTATGGAAACAACATTGGTCTTACTGGCGGAATCCGCGATACAATGGATTAAGGTTTCTCTTCACAGTTGCTGCCTCCATCTTTTTCGGGTGCATGTTTTATGGCATTGGTTCCAAAATTGAAAAGCGACAAGATCTCTCGAACACCATAGGCTCAATGTTGATAACTGTTCTACTTGTTGGCATTAAGAATGCTAATTCCGTGCAAGGAGTAGTGGGTATTGAGAGAAGAGTCTTCTATAAGGAAAATTCTGCAGGAATGTATTCTTCGCTTGCCTATTCTATTGCTCAGGCCCTAATTGAAATCCCTTATGTTCTAATACAAACGTTGATATATGGAACCATAGTTTATACAATGGTTGGATTCGAGTGGAGTGTGACTAAATTTTTTTGGTACATATATTTTATGTTCTTCACCTCTCTATACTTTACCTACTACGGCATGATGTCACTAGCCATAACACCAAACCAAAACGCAACCACTTTCCTTACTCGTCTTTCCTATGTATTATGGAACCTTTTCTCAGGATTCGTAGTCTCACCACCAAAAATTCCAATATGGTGGAGATGGTTTTATTGGACGAATCCAATAGCATGGAGTTTGAATGGATTGGTGACTTCACAATTTGGAGATATAAAAGATCATATTGAGTTCAACGGAACAAGTGTTTCAGTACAAGACTTTTTGGAAAGTTACTATGGTTTCAAGCATGATTTTTTGGGAGTAGTTGCAGCTGTAGTAGTTGGATTCACATTGGCTTTTGTGTTGGTTTTTGTCATGTCTATCAGGATGTTTAATTTCCCGTTGTGA 4080 0.3934 MEESEQTSLKWAAIQSLPTVARLRRGLLTTPNGESNEIDVHNIGLQERTYLLQRLVTHDVDTDDSFLLKLMRDRYDRAGVGIPTIEVRFQDLNVQAQVQLGKRAFPTITNYMLDMLEAPLKYVLKRRKQDLNILQDVSGIIKHSRMTLLLGPPSSGKTTLLLALAGKLDPNLKFTGKVTYNGHEMNEFVPQRTAVYVDQNDVHFGELTVRETLAFSARVQGVGPRYDILEEVCRKEEEENIIPDPDIDVYMKTVATEDQRANVITDYILKILGLDNCGDSMLRGEMLVGPIKAYFMDEISNGLDDSTTFQIVKSLKQFVCLLKRTAMISLQQPSLETYNLFDDIILLSDGHIVYHGPCEQVLDFFSSMGFLCPERKSVIDFLQEVTSVKDQEQYWVQNEKPYRFVTAEEFAEAFETSHNGRRLGNELATQFDKSKSHPGALTSNKYGIAKRELFKICLSREYLLIKRNSFYYILKLLQIALVAVITMTVFLPTQMHHDSVSDGGIYAGALFYGSLVILLNGFAELSMMVGRLPVFYKQRDLLFFPSWAYALPSWILKVPINFAEVGIWVFFTYSVIGDPNVIGRTFLLLVLASQMANVFCRLVAAIGREMSMAGTLGLFSLAMLVVVVSKDNIKKWWLCEFWISPTMYGQNALLSNEFHGKTWRHVLPNSTEPLGVQVLKSRGFFTQSYWYWIGFGALIGYTLLFIIGNILALTFLNPLKEHQVVKSIWSLSRTKQSVMDSEHNRKSVMILPFEPHCITFVDLTYSVNMPQSQEKINQGVTGDRLNLLKDVNGAFRPGVLTALMCVNGAGKTTLMDVLTGRKTKGYISGNITISGYPKKQDSFTRICGYCDQNDIHSPYVTVYESLLFSAWLRLSAEINDETRKMFIEEVMELVELTTLKDAIVGLPGANGLSTQQRKRLTIAVELLANPSIIFMDDPTSGLDATSVSIVMRVIRTLVDNRRTIVCAIHQPKVDIFEYFDELFLMKQGGQVIYAGPIGHHSSHLISYFEGIQGVSKIKDGCNSATWMLEVTSSVKEMELGIDFAEVYKNSELHRRNKALIAELSVPAPDSEDLLFPSKYSRPLFTQCKACLWKQHWSYWRNPRYNGLRFLFTVAASIFFGCMFYGIGSKIEKRQDLSNTIGSMLITVLLVGIKNANSVQGVVGIERRVFYKENSAGMYSSLAYSIAQALIEIPYVLIQTLIYGTIVYTMVGFEWSVTKFFWYIYFMFFTSLYFTYYGMMSLAITPNQNATTFLTRLSYVLWNLFSGFVVSPPKIPIWWRWFYWTNPIAWSLNGLVTSQFGDIKDHIEFNGTSVSVQDFLESYYGFKHDFLGVVAAVVVGFTLAFVLVFVMSIRMFNFPL 1359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03736 1359 CDD ABCG_PDR_domain2 755 995 IPR034003 -
Vivi6g03736 1359 Pfam ABC-2 type transporter 1085 1299 IPR013525 GO:0016020|GO:0140359
Vivi6g03736 1359 Pfam ABC-2 type transporter 453 658 IPR013525 GO:0016020|GO:0140359
Vivi6g03736 1359 Pfam ABC transporter 134 259 IPR003439 GO:0005524
Vivi6g03736 1359 Gene3D - 119 368 IPR027417 -
Vivi6g03736 1359 FunFam ABC transporter G family member 34 121 408 - -
Vivi6g03736 1359 FunFam ABC transporter G family member 40 774 1004 - -
Vivi6g03736 1359 Gene3D - 775 1007 IPR027417 -
Vivi6g03736 1359 Pfam Plant PDR ABC transporter associated 663 725 IPR013581 -
Vivi6g03736 1359 Pfam ABC-transporter N-terminal 62 110 IPR029481 -
Vivi6g03736 1359 Pfam ABC transporter 788 940 IPR003439 GO:0005524
Vivi6g03736 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 374 IPR027417 -
Vivi6g03736 1359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 758 1012 IPR003439 GO:0005524
Vivi6g03736 1359 SMART AAA_5 143 351 IPR003593 GO:0016887
Vivi6g03736 1359 SMART AAA_5 797 989 IPR003593 GO:0016887
Vivi6g03736 1359 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 783 997 IPR027417 -
Vivi6g03736 1359 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 2 1357 - -
Vivi6g03736 1359 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 118 374 IPR003439 GO:0005524
Vivi6g03736 1359 Pfam ABC-2 type transporter 332 426 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03736 Vivi-Chr6 132437160 132443915 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03736 K08711 - gmx:100813417 1856.65