Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03681 ATGGGAACAGAATCAAAGTCTCAAACAATCCCTATTATTGACTTCTCCGACCAAAACATGAAACCTGGTACAGACACATGGCTCTCAGCTTCCAACGTTGTAAGGACTTCACTAGAAAACTTTGGTTGTTTTGTAGCAAACTACGATAGAGTCGGGAAAGAGCTTTGCAACTCTGTTGTTTTACAAATAGAAGAACTATTCTCACTCCCTTTAGAAACAAAAGTGCAAAAAACTAGTAACACTGACAGGCCTTTCCATGGATACATAGGACAAGTCCCATGGCTTCCATTATATGAATCTTTAGCCATCATAGATCCATTAACTATGCTTGGATGTCAAAAGTTCGCGCAAATCATGTGGTCTCAAGGAAATGATCGTTTCTGTGAAATCATGAATGAGTATTCTAAGCTATTGGGAGAGTTAGACCATATAGCTAAGAGAATGGTGTTTGAGAGCTATGGAGTGGATATGAAGATATGTGATTCTTTGATAGAGTCAAGCAATTATCTGATTCGAGTCATGAAATACAGAAGACCTGATATTGATGAAAATGATTTGGGACTTCAACCTCACTCGGATTTAACCATTGTATCGGTAGTACATCAGTTGAATAATCTGAATGGTTTGGAAATCAAGATGAAGAATGGAGATTGGGTTGGGGTTGATGCTTCACCTTCCTCCTTTGTTGTCATGGCTGGTGACGCACTCAAGGTGTGGAGTAATGGGAGGATTCGTTCATGTGAGCATAGAGTAACAATGAATGCAAAGAAAACAAGATACTCAACTGGACTATTTTCTTTTGGTGGTAAGATGATGGAGATACCAAAAGAGTTTGTGAATGAGGAACATCCATTGCGTTATAAACCAACATTCAACCATTATGACTACCTTCGTTTCTATGAGAAAGAAAAAATTAATGAAACTAGTTCAAGGATTGAAGCGTATTTTGGAATTGATTTGAAGCCTAATACAATATGA 978 0.3783 MGTESKSQTIPIIDFSDQNMKPGTDTWLSASNVVRTSLENFGCFVANYDRVGKELCNSVVLQIEELFSLPLETKVQKTSNTDRPFHGYIGQVPWLPLYESLAIIDPLTMLGCQKFAQIMWSQGNDRFCEIMNEYSKLLGELDHIAKRMVFESYGVDMKICDSLIESSNYLIRVMKYRRPDIDENDLGLQPHSDLTIVSVVHQLNNLNGLEIKMKNGDWVGVDASPSSFVVMAGDALKVWSNGRIRSCEHRVTMNAKKTRYSTGLFSFGGKMMEIPKEFVNEEHPLRYKPTFNHYDYLRFYEKEKINETSSRIEAYFGIDLKPNTI 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03681 325 FunFam Probable 2-oxoglutarate-dependent dioxygenase AOP1.2 3 305 - -
Vivi6g03681 325 Pfam 2OG-Fe(II) oxygenase superfamily 173 265 IPR044861 -
Vivi6g03681 325 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 89 IPR026992 -
Vivi6g03681 325 SUPERFAMILY Clavaminate synthase-like 6 305 - -
Vivi6g03681 325 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 166 270 IPR005123 -
Vivi6g03681 325 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 10 298 - -
Vivi6g03681 325 Gene3D - 7 321 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03681 Vivi-Chr6 131373347 131375023 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03681 129 309 Glycosyltransferase AT5G59530 30.890 1.27e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03681 - - gmx:100775440 490.73