Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03680 ATGGCTCAATTACTATCATCTTCTTGCTCCTTGGCTTTCTCTTCTACAAATAAACCTTATAACCAAACCTCAGCACCATTTTCTAATTCTAACAGAGTTGGTTGTGATTTTTCCAGAACTCGATTTAGACGTCTTTTCTCGCAACAGAAGCCAAGTAAACGTTTTGCAGTTGTAAATGCCGCTACTGTTTCAACCGGCCAGGAAACCCCGGTTCAAACTAGTTCCGGGGAGCCTTTTAAACCGAAGCGAGTCATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCGACTGCTCTCCATCTTTCTAACAAAGGTTACAATGTTGCCATTGTCGATAACCTTGTTCGACGCCTTTTCGATCACCAGCTTGGTTTAGATTCTTTGACGCCGATTTCCTCCATTCAGGATCGTCTTCAGTGTTGGAAATCGCTCACCGGGAAAAGTATTGAGCTATATGTTGGTGATATATGTGAGTTTGAGTTCTTATCTGAAACGTTCAGGTCGTATGAGCCGGATGCTGTTGTACATTTCGGGGAACAGCGTTCTGCTCCTTTTTCTATGATAGATCGGTCGAGAGCGGTGTATACACAGCAGAACAATGTTGTTGGAACGCTGAATGTGCTTTTCGCTATAAAAGAGTATAAAGAGGATTGTCATTTGGTTAAGCTTGGGACAATGGGTGAATACGGGACTCCGAATATTGATATCGAGGAAGGTTATATTACCATTACTCACAATGGAAGAACTGACACTTTGCCGTATCCGAAGCAAGCTAGCTCGTTCTATCATTTGAGCAAGGTGCATGATTCGCATAACATAGCTTTCACTTGTAAAGCTTGGGGGATCCGGGCAACTGATCTGAATCAAGGAGTTGTATACGGAGTAAAAACAGATGAGACTGCAATGCATGAAGAGCTGTGTAATAGGTTTGATTATGATGCCATATTTGGAACTGCGTTGAATCGGTTTTGTGTTCAGGCTGCTGTTGGTCATCCACTCACTGTTTATGGTAAAGGAGGCCAGACTAGGGCCTTCCTTGACATAAGAGATACAGTCCAATGTGTTGAGCTTGCAATTGCGAACCCGGCCAACCCAGGAGAATTTAGAGTCTTCAATCAATTTACGGAACAATTTAAAGTTAGTGAACTGGCCAACATTGTTACAAAAGCAGGCGAGAAGCTAGGTCTTGATGTGAAAACCATATCAGTTCCTAACCCAAGAGTGGAGTTAGAAGAGCATTATTACAATTGCAAAAACACTAAACTAGTTGATCTTGGACTCAGACCGCACTTTCTTTCAGATTCCCTCATTGATTCACTTCTTAACTTCGCGGTTCAGTACAAAGACCGTGTTGACACAAAGCAAATTATGCCTGGTGTTTCTTGGAGAAAGGTTGGGGTCAAAACAAAAACTATTTAA 1419 0.4242 MAQLLSSSCSLAFSSTNKPYNQTSAPFSNSNRVGCDFSRTRFRRLFSQQKPSKRFAVVNAATVSTGQETPVQTSSGEPFKPKRVMVIGGDGYCGWATALHLSNKGYNVAIVDNLVRRLFDHQLGLDSLTPISSIQDRLQCWKSLTGKSIELYVGDICEFEFLSETFRSYEPDAVVHFGEQRSAPFSMIDRSRAVYTQQNNVVGTLNVLFAIKEYKEDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETAMHEELCNRFDYDAIFGTALNRFCVQAAVGHPLTVYGKGGQTRAFLDIRDTVQCVELAIANPANPGEFRVFNQFTEQFKVSELANIVTKAGEKLGLDVKTISVPNPRVELEEHYYNCKNTKLVDLGLRPHFLSDSLIDSLLNFAVQYKDRVDTKQIMPGVSWRKVGVKTKTI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03680 472 CDD SQD1_like_SDR_e 83 463 - -
Vivi6g03680 472 Pfam NAD dependent epimerase/dehydratase family 84 372 IPR001509 -
Vivi6g03680 472 Gene3D - 83 374 - -
Vivi6g03680 472 Gene3D - 290 451 - -
Vivi6g03680 472 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 80 462 - -
Vivi6g03680 472 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 451 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03680 Vivi-Chr6 131369322 131371663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03680 1 472 Acyl Lipid Metabolism Gene Families AT4G33030 76.000 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03680 K06118 - gmx:100805019 833.943