Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03666 ATGGCCGTTATGAGTGGTTTGAGAGTTCTTCTATCTTCCAAATCGAGGTCAGTGGCGCCACTCGTTAAATCATGGCGGTCGGCGTTGTACTCTTCCTCCGCGGCGGTGGTGGCTGATGAAGGTTTCGAGAGCGGTGCGTATTTGAAGGATTATGCTGATTATAGAAGATCTCTGTACGGTGAGATTACTCATAAGGCTCTTCTTGTTGATGCTGTTGGGACTCTTGTTCTTCCTTCTCAACCTATGGCTCAGATATATAGAAAGATTGGGGAGAAATATGGAGTGAAGTATTCAGAGGAAGAGATTTTGCATAGATACAGAAGAGCTTATAGTCAGCCTTGGGGCAAATCTCGTCTCAGATATGTTAAGGATGGTAGACCGTTCTGGCAATACATAGTTAGTAACTCTACCGGCTGTGATGATTCTCAATACTTTGAAGAACTTTATAACTACTATGTGACAGACAAGGCATGGCACCTGTGTGATCCTAATGCAGGAGAAGTGTTCAAAGCTCTTAGAAAATCAGGTGTAAAATTGGCTGTTGTGTCAAATTTTGACACTCGGTTAAGACCTCTCCTGCGGGCATTGAACTGTGATGATTGGTTTGATGCTGTAGCAGTATCAGCTGAGGTTGCAGCAGAGAAACCAAATCCAACTATATTTCTTAAAGCGTGTGAACTACTGGACGTAAAACCCGAGGATGCTGTTCATGTCGGGGATGACCGCCGTAATGATGTATGGGGTGCTAGAGATGCAGGCTGTGATGCCTGGCTTTGGGGAAGTGATGTTCACTCTTTTAAGGAGGTTGCACAGAGGATCGGGGTCCAGGTCTAA 834 0.4508 MAVMSGLRVLLSSKSRSVAPLVKSWRSALYSSSAAVVADEGFESGAYLKDYADYRRSLYGEITHKALLVDAVGTLVLPSQPMAQIYRKIGEKYGVKYSEEEILHRYRRAYSQPWGKSRLRYVKDGRPFWQYIVSNSTGCDDSQYFEELYNYYVTDKAWHLCDPNAGEVFKALRKSGVKLAVVSNFDTRLRPLLRALNCDDWFDAVAVSAEVAAEKPNPTIFLKACELLDVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGVQV 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03666 277 Gene3D - 80 153 IPR044924 -
Vivi6g03666 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 202 218 IPR006439 -
Vivi6g03666 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 172 185 IPR006439 -
Vivi6g03666 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 64 75 IPR006439 -
Vivi6g03666 277 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 220 240 IPR006439 -
Vivi6g03666 277 SFLD Haloacid Dehalogenase 65 259 - -
Vivi6g03666 277 NCBIfam HAD-IA family hydrolase 156 255 IPR006439 -
Vivi6g03666 277 Pfam Haloacid dehalogenase-like hydrolase 73 256 IPR041492 -
Vivi6g03666 277 CDD HAD_dREG-2_like 165 276 - -
Vivi6g03666 277 Gene3D - 69 261 IPR023214 -
Vivi6g03666 277 NCBIfam HAD hydrolase, REG-2-like, family IA 65 258 IPR011949 -
Vivi6g03666 277 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 65 259 - -
Vivi6g03666 277 NCBIfam HAD-IA family hydrolase 173 253 IPR006439 -
Vivi6g03666 277 PANTHER - 27 276 - -
Vivi6g03666 277 SUPERFAMILY HAD-like 65 268 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03666 Vivi-Chr6 131078983 131082352 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03666 - - gmx:100789672 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03666 6 131078983 131082352 Vivi6g03666 6 131078983 131082352 ECH