Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03658 ATGGACGCCAAAATCGGAAGCCTCATCGAATCCGTCGGAAACTTCTTCACCGGCGGCGATCAGATCCCCTGGTGCGACCGTGATGTTATCTCTGGCTGTGAAAGAGAGGTTGCAGCAGCTTCTGATGGTGACTCTGATGAGCGGAGGAATGAGAGCATAATGAGGTTGTCGTGGGCACTTGTTCATTCAAGGCAAAAAGAAGACATTCAGCGTGGGGTCGCCATGCTTGAAACTTCTTTGGGCAATGATAAAAGTCCTTTACATCAAAGAGAGAAGCTTTATCTTCTTGCTGTTGGGTACTACAGGACTAATGATTATACTAGGAGTCGACAGCTTCTAGAGCAATGTTTGGAGATTGCACCCGATTGGAGGCAGGCACTGTCCCTCAAGAAAGCAGTTGAAGATCGAATTGCAAAGGATGGTGTTATAGGAATTGGCATCACTGCAACAGTTGTGGGGCTTATAGTTGGTGGTGTTGCTACAGCATTGGCCCGAAGGAATTGA 504 0.4762 MDAKIGSLIESVGNFFTGGDQIPWCDRDVISGCEREVAAASDGDSDERRNESIMRLSWALVHSRQKEDIQRGVAMLETSLGNDKSPLHQREKLYLLAVGYYRTNDYTRSRQLLEQCLEIAPDWRQALSLKKAVEDRIAKDGVIGIGITATVVGLIVGGVATALARRN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03658 167 Gene3D Tetratricopeptide repeat domain 24 166 IPR011990 GO:0005515
Vivi6g03658 167 SUPERFAMILY TPR-like 10 166 IPR011990 GO:0005515
Vivi6g03658 167 Pfam Fis1 C-terminal tetratricopeptide repeat 90 142 IPR028061 -
Vivi6g03658 167 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 7 163 IPR016543 GO:0000266
Vivi6g03658 167 FunFam Mitochondrial fission 1 protein 24 167 - -
Vivi6g03658 167 PIRSF TPR_repeat_11_Fis1 4 166 IPR016543 GO:0000266
Vivi6g03658 167 Pfam Fis1 N-terminal tetratricopeptide repeat 51 80 IPR028058 -
Vivi6g03658 167 CDD Fis1 23 141 IPR033745 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03658 Vivi-Chr6 130844574 130850867 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03658 K17969 - gmx:100785425 309.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03658 6 130844574 130850867 Vivi6g03658 6 130844574 130850867 ECH