Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03639 ATGCACAAAATTGTACAAAGGGCGCGATTCTCGAATCGCAATCGCGCACCAATTCTAACACACTCAAACTTGGACCCATCGCAACTTGTTTCCAACTTTTCAGACCGTGCTACCATTGATACAAATTCAACGTTTTCAACTTATGCTGCCATCGACGGAGCTCGCAGAAATGAATCTCTTGATTTGCGGGAAATTACAAACACAAGAGAACTTAGGAACACATTTGACAAATACAATAGAAACGTTTTGTCTCGATGCCTGAACTGGACCTCGGGGGCAATTAATAATCATCATGCAGCCAGCTATGTGGTAAATCGTCATTTTACAGCCGATCACAATGACAAATGCACAAAGGAGTTCTCAAGTAAGCATCTTAAAAATATTCCAGATTTTGTAAGGATAGTGGAGGTTGGTGCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCCACTGATGTGAAAATTGAATTGATAAAACTGCTAGTTTCTTCGGGGTTGTCTGTTGTTGAGGCTACAAGTTTTGTCTCACCAAAATGGGTGCCACAGTTGGCAGATGCAAAGGATGTATTGACAGCAATTCAAGACGTTGAAGGTGCTAGCTTTCCCGTCTTAACTCCAAATCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTGTTTTTCCTGCTGCTTCTGAATCATTCTCTAAAGCAAATCTCAATTGTGGCATTGAGGATAACCTTGCTCGTTGCCGTGATATTGCTTCAGCTTCTAGAAGCCTCAAGATCCCAGTTCGTGGATACATATCATGTGTTGTGGGATGTCCTTTGGAAGGAAAAATTGCTCCCGCAAAAGTAGCATACGTTGCAAAATCACTTTATGAGATGGGGATCTCGGAGATTTCATTAGGGGATACAATTGGTGTTGGCACACCTGGTAGCGTCATTCCTATGCTAGAAGCTGTTCTTGATGTTGTTCCAATTGACAAGCTTGCTGTCCATTTTCACGATACTTATGGTCAGGCACTTTCAAATATTCTAATTTCACTACAGATGGGGATCAGCACAGTGGATTCATCTGTCTCTGGTCTTGGAGGCTGTCCATATGCGAAGGGTGCAACTGGGAATGTAGCCACTGAAGATGTTGTTTATATGCTGAATGGACTTGGAGTTAAAACTAATGTGGACCTTGGAAAACTTATGCTTGCTGGGGATTTCATCTGCAAGCATTTAAGACGAGCATCTGGTTCAAAAGTTGCAACTGCATTGAGTAAAGTTACAAATAGTGCCTCTAAACTGTGA 1296 0.4221 MHKIVQRARFSNRNRAPILTHSNLDPSQLVSNFSDRATIDTNSTFSTYAAIDGARRNESLDLREITNTRELRNTFDKYNRNVLSRCLNWTSGAINNHHAASYVVNRHFTADHNDKCTKEFSSKHLKNIPDFVRIVEVGARDGLQNEKVIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLTAIQDVEGASFPVLTPNLKGFEAAVAAGAKEVAVFPAASESFSKANLNCGIEDNLARCRDIASASRSLKIPVRGYISCVVGCPLEGKIAPAKVAYVAKSLYEMGISEISLGDTIGVGTPGSVIPMLEAVLDVVPIDKLAVHFHDTYGQALSNILISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVKTNVDLGKLMLAGDFICKHLRRASGSKVATALSKVTNSASKL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03639 431 ProSiteProfiles Pyruvate carboxyltransferase domain. 132 399 IPR000891 GO:0003824
Vivi6g03639 431 Pfam HMGL-like 132 404 IPR000891 GO:0003824
Vivi6g03639 431 SUPERFAMILY Aldolase 127 415 - -
Vivi6g03639 431 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 112 425 IPR043594 GO:0016833
Vivi6g03639 431 Gene3D Aldolase class I 125 424 IPR013785 -
Vivi6g03639 431 CDD DRE_TIM_HMGL 134 407 - -
Vivi6g03639 431 FunFam Hydroxymethylglutaryl-CoA lyase, mitochondrial 126 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03639 Vivi-Chr6 130382977 130389726 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03639 K01640 - gmx:100801507 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03639 6 130382977 130389726 Vivi6g03639 6 130382977 130389726 ECH