Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03620 ATGGCTTCACAACAACAAACTGTTCGTGAGTGGTCTGGAATCAATACATTCGCTCCTGCTACTCAGACTAAGTTGCTTGAACTCTTGGGACAACTTAAACAAGAGGATGTGAACTCCTTGACTATACTTGTGATGGGAAAAGGTGGCGTTGGGAAGTCTTCAACTGTGAACTCCATTATTGGGGAAAGGGTGGTTTCAATTAGTCCCTTTCAGTCTGAAGGGCCAAGACCTGTTATGGTGTCACGATCAAGGGCAGGTTTTACATTGAACATTATCGATACTCCTGGTCTTATTGAAGGGGGATACATCAATGATATGGCGCTTAATATAATAAAAAGTTTCCTTCTGGACAAGACCATAGATGTTCTGCTTTATGTGGACCGCTTAGATGCGTATCGAGTAGACAACTTGGATAAGTTAGTCGCCAAAGCTATAACTGACAGTTTTGGCAAAGGAATATGGAAGAAGGCTATAGTAGCACTCACACATGCCCAATTCTCTCCTCCAGATGGATTGCCTTATGATGAATTCTTCTCAAAAAGATCCGAGGCTCTCTTGCAAGTTGTAAGATCAGGTGCCTCCTTAAAGAAGGATGCTCAGGCTTCTGAGATTCCTGTTGTTTTGATCGAGAATAGCGGGAGATGCAACAAAAATGACAGTGATGAAAAGGTTCTTCCAAATGGGATTGCTTGGATTCCTCATCTAGTCCAAACAATCACTGAAGTTGCATTGAACAAAAGTGAATCTATTTTTGTTGACAAAAAATTGATTGATGGACCGAATCCAAATCAGCGAGGAAAATTATGGATTCCTCTCTTATTTGCTCTACAATACTTCTTTCTCATGAAGCCAATAGAAGGACTAATCAGGAACGACCTTGCTAATGAAAAAAAACCAGCATGGGAGACTCGTGATACGGGTGCAGGTGTTCGGAAGTATTAG 942 0.414 MASQQQTVREWSGINTFAPATQTKLLELLGQLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWKKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASLKKDAQASEIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLVQTITEVALNKSESIFVDKKLIDGPNPNQRGKLWIPLLFALQYFFLMKPIEGLIRNDLANEKKPAWETRDTGAGVRKY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03620 313 PIRSF Toc33/toc34 1 310 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vivi6g03620 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 258 IPR027417 -
Vivi6g03620 313 NCBIfam GTP-binding protein 1 312 IPR005688 GO:0006886|GO:0009707|GO:0015450
Vivi6g03620 313 CDD Toc34_like 9 253 - -
Vivi6g03620 313 ProSiteProfiles AIG1-type G domain profile. 37 260 IPR006703 GO:0005525
Vivi6g03620 313 PANTHER GTPASE, IMAP FAMILY MEMBER-RELATED 39 211 IPR045058 -
Vivi6g03620 313 FunFam Translocase of chloroplast 4 269 - -
Vivi6g03620 313 Gene3D - 1 269 IPR027417 -
Vivi6g03620 313 Pfam AIG1 family 40 229 IPR006703 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03620 Vivi-Chr6 129958683 129962325 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03620 - - mtr:11438484 545.428