Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03579 ATGAATCCACTATCAACCTTCAGATACAGAATCTTCCAATCAACAACAACTCCATTCTCACCCTTTTTCCTCTTCAACCAAAAACGATGGAAAAAACCCGTTATTTCAGCGCAAACTCGTTTAGAGGACCGAGTAAGAGACCCACACTTCGACAAACTAACAACCCATTTCAAAAAACTCAACGTTGTCCTCAAAATCCACACCCTCATGTCAAATCGAAAACGCGGTTCTTTCGTTTCGCTTCAGCTCATGTCCCGTTGGAGAAACATCCTCGGACTCAATGTCACTGTCACTTCCTTTCTTCAAAAATACCCTCATGTTTTTGACCTCTTTCTCCACCCTTTTAGGAGGAACATGTGTTGTAGGATCACGAGGAAGATGAAGGAGTTGATATTGCTGGAAGAGGTTGTTGCGAAAAGGTGCGAGCTTGAGACTGTGATGAGGTTGAAGAAGTTGCTTATGATGTCGTTGAATGGTACTCTTCATGTGCATGCTTTGAGGTTGATGAGAAGAGAATTGGGTCTTCCTTGTGATTTTAGAGACTCCATTCTTGGGAAGTATTGTGATGAGTTTAGGTTGGTTGATTTGGAGATTGTGGAATTGGTTGGTTGGGATGATGAATTGGGAATGGCTTGTGTTGAGGAATGGAGGGAGAGAGAGTATAGAGAGAAATGGTTGAGTGAATTTGAGACCAAGTTTGCTTTTCCTATGAATTTCCCAACTGGGTTTAAGATTGAAAGAGGGTTTAGGGAAAAGTTGAAGACTTGGCAAAGGCTTTCTTATACGAAGCCTTATGAGAGGAAAGATGTAAAATGCGGCGGAGCGCAACGCTATGAGAAGAGGGCGGTTGCTGTTCTTCATGAGCTGTTGAGTCTGACTGTGGAGAAAATGGTTGAGGTTGATCAGTTGGCTCATTTTCGAAGGGATTTTGCTATCGAAGTTAATATGCGCGAGGTACTGCTTAGGCATCCGGGGATATTTTACATATCGACAAAAGGAAATGCTCAAACGGTTTTTCTTAGGGAGGCTTATGAGAAAGGAAGGTTGGTTGAGCCTAATCCGGTGTATGAAACTCGTAGGAATATGTTGGAGCTTGTGTTATTAGGACGCAGGAAAACCAAACAGTTATTAGCTTCTGATGAATTTAAAGAAGAGAGCAATACTGTCGTTTGTAAAGTAGATGGAGGTAAAAGAGAAGGAGATTGGGCGATTCAATTCTTGGAGGGTTGCGAGAAGAATTGA 1242 0.4219 MNPLSTFRYRIFQSTTTPFSPFFLFNQKRWKKPVISAQTRLEDRVRDPHFDKLTTHFKKLNVVLKIHTLMSNRKRGSFVSLQLMSRWRNILGLNVTVTSFLQKYPHVFDLFLHPFRRNMCCRITRKMKELILLEEVVAKRCELETVMRLKKLLMMSLNGTLHVHALRLMRRELGLPCDFRDSILGKYCDEFRLVDLEIVELVGWDDELGMACVEEWREREYREKWLSEFETKFAFPMNFPTGFKIERGFREKLKTWQRLSYTKPYERKDVKCGGAQRYEKRAVAVLHELLSLTVEKMVEVDQLAHFRRDFAIEVNMREVLLRHPGIFYISTKGNAQTVFLREAYEKGRLVEPNPVYETRRNMLELVLLGRRKTKQLLASDEFKEESNTVVCKVDGGKREGDWAIQFLEGCEKN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03579 413 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 22 383 IPR045040 GO:0003723
Vivi6g03579 413 Pfam Plant organelle RNA recognition domain 45 370 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03579 Vivi-Chr6 129144371 129149012 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03579 - - gmx:100789857 594.734