Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03565 ATGATTAGGAGTAGAAATCAGCAATTTGGGTCTCCTCCTTCGGGTGTTGGGGCCCATGATATGAAACCGAGGAGGCTCTATCAAGTTTGGAGAGGAGGCAATAAGTTTCTCTGTGGTGGGAGACTGGTTTTCGGTCCTGATGTAGCTTCCTTGTTCCTTACATCATTCCTAATTGCTGCACCTGCAATTACATTTTGTGTCAAGATGTATCTTAAAGCCAAGAATGAGAATGCCAGTAGTGGTCGTGTTTTTTGGTGTCCCGTAGTGATTGTCGGTCTAACTCTCACTATTCTGGATTTCCTATTCCTTCTCTTGACTTCCGGGAGAGATCCTGGAATTATCCCTAGAAATTCAACACCTCCTGAATGCGACGAAACATTTAATATACCTACTCCTTCCATGGAGTGGATTAATGGTTCGACCCCTCATCTGAAACTACCTCGAACTAAAGATGTAATGATTAATGGTCACACGGTGAAAGTGAAGTTCTGTGATACATGCTTGCTTTATCGTCCCCCTCGTACTTCTCATTGTTCTATATGCAACAACTGTGTCCAGAAATTCGATCATCACTGTCCTTGGGTTGGCCAGTGCATCGGAAGACGAAACTATCGGTACTTCTTCATGTTTATTACAACATCAACCTTTTTGTGCCTATATGTCTTTGTGTTCTCTTGGGTCAATCTTTCCAAGAGCAAGGACGATGTTTGGGACGCAATCTCACATGATTATGTATCGGATTTTCTCATTATATATTGCTTCATTGCTGTCTGGTTTGTCGGGGGCCTCACAGCTTTCCATTTCTATCTCATTTGTACAAACCAGACAACTTACGAAAACTTCCGGTACCAATATGATAAAAAGGGGAATCCATACAATAAGGGACCACTGGCAAATATTGGAGAAACACTCTGTTCCAGTATTCCCGCTTCAAAGAATAATTTCCGATCATTTGTACAGCAAGATGAACATACGATGGCTGGGTCATTGACTCCGAATAATGCGGACGGAATTTTGACACCAAAGGAGAAAATTGATGTTGAAATGGGATCAAGGCGTGCTGATGACGGTGGTTTTCCGATTCCTGAACTTCTGCGGAATTTTGATTTTGATAATTTCGAGGATGACATGAAGTTTGGAGATGATGAGGAGGGACGAGGCTCATTTGATCCATTCTACAGTGTCGATGAAAATGTTAAGGACTCGGCCCGTACATCTGTCGCCACAGTTTTAAATTTCCACAGCATCACAGTTGAAGATGCAACGGAAGACTCTGTTCATAGTTGCCGTGCTGATTTCGAAGTCAAAGAATCTGCTAAAAGGCCTGTCGCTATTGATGAAATAAATGCAGTTAAAGAAACTGATGACAGAAATGACTCATTTAAGCCATAA 1392 0.4203 MIRSRNQQFGSPPSGVGAHDMKPRRLYQVWRGGNKFLCGGRLVFGPDVASLFLTSFLIAAPAITFCVKMYLKAKNENASSGRVFWCPVVIVGLTLTILDFLFLLLTSGRDPGIIPRNSTPPECDETFNIPTPSMEWINGSTPHLKLPRTKDVMINGHTVKVKFCDTCLLYRPPRTSHCSICNNCVQKFDHHCPWVGQCIGRRNYRYFFMFITTSTFLCLYVFVFSWVNLSKSKDDVWDAISHDYVSDFLIIYCFIAVWFVGGLTAFHFYLICTNQTTYENFRYQYDKKGNPYNKGPLANIGETLCSSIPASKNNFRSFVQQDEHTMAGSLTPNNADGILTPKEKIDVEMGSRRADDGGFPIPELLRNFDFDNFEDDMKFGDDEEGRGSFDPFYSVDENVKDSARTSVATVLNFHSITVEDATEDSVHSCRADFEVKESAKRPVAIDEINAVKETDDRNDSFKP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03565 463 Pfam DHHC palmitoyltransferase 161 283 IPR001594 GO:0016409
Vivi6g03565 463 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 58 320 - -
Vivi6g03565 463 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g03565 463 ProSiteProfiles DHHC domain profile. 162 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03565 Vivi-Chr6 128976887 128980900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03565 93 306 Lipid Metabolism Gene Families AT4G22750 27.313 1.39e-14 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03565 - - gmx:100779696 693.73