Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03546 ATGTCGCTAGCAGTTTCTTCCTCGCCCAAAAAATGGATGACAAATTGTGTTATGGTTCTCAACTCACTGTTATGTTACGTTGTTTTCCTTTTCTTTGATTTTCTAGATGCTGTTTTATGTGTTGTCTATAGATACCTTGATGAGCGTATTGAAGGTGTGGCCTCTCCTTGTTGTTGCTCTAAATGGAAGAGACAGAAGAACAAGACTATGATGATTGATGATGGTCTTTCAGATAGTTTGTATGAGAGGAAGAACGTGTTCAGAGAAATGGGTTTGCTTCAATTTAGGAGAAAACAGGAAGATTCCAATGGAAAATGTGGTGGAAGGAAAGTGAATAGTTGGTCTGATTGTGGGTGTGACTCTTGTCTTTCATGGGTCAATGCTGATGATGATGATGACTATAAACTTCATTTTGTTGTTAAGGAACCCTTCATAGCTACTGGTGAAAATTGCAGGGATGAGCCTTGTGAGAATGTGATATTCTTGCATGGATTTATGTCTTCTTCCTCATTTTGGACACAGACAGTGTTTCCATGTTTCTCTGAAAATGTAAATCATAACTATAGATTGATTGCCATAGACCTGTTGGGGTTTGGAAAGAGTCCTAAGCCAAGAGATTGTTTGTACACTTTGAAGGATCATGTGGAAATGATTGAGAAATCAGTGGTTCAACCATTGGAGTTAGGTAGTTTTCATCTGGTTGCACACTCTATGGGGAGTGTAATTGCATTGGCTTTGGCTGCTAAGTATACCAATTGTGTAAAATCAATTACCCTTGTTGCACCTCCATACTCTTCTTCTGAGGAAAAAGATGCTTGTTTGAAAGCACTTGAAAAGTTTGCTGGAAAGAAATTGTGGCCAATGTTATCAGCAGGATCTTCATTTATGTCATGGTATGAGCATTTGAGTCGAACTGTTTGCCTTATCTATTGCAGAAATCACAGGATATGGGAGTGGATTCTAAAGTTCATTACTCGAAAGAGGGATCTTAGTTTCTTGATCACAGACATGACAAGACATACTCATCAATCTGCTTGGAATTCCATGCATAATGTGATATGTGGAGGAACAAAATTCATGGATAGTTACTTGAAAATTTTGACAAAAAGTGGAGTTAGAATAAATGTTATACAAGGTGATAGAGATCAAGTTGTCCCTATGGAGTGCATCAGGGAGTTAAAGTTGAAGGCTCCAAATGTTGAAATTAACATAATTCCAAATGCTGACCATAGCAGTATGCTATTAGGCAGAGAGAAGAAATTTGCACAAAGTTTGGAGCATATATGGACCTCTTCTTGTTGA 1302 0.3794 MSLAVSSSPKKWMTNCVMVLNSLLCYVVFLFFDFLDAVLCVVYRYLDERIEGVASPCCCSKWKRQKNKTMMIDDGLSDSLYERKNVFREMGLLQFRRKQEDSNGKCGGRKVNSWSDCGCDSCLSWVNADDDDDYKLHFVVKEPFIATGENCRDEPCENVIFLHGFMSSSSFWTQTVFPCFSENVNHNYRLIAIDLLGFGKSPKPRDCLYTLKDHVEMIEKSVVQPLELGSFHLVAHSMGSVIALALAAKYTNCVKSITLVAPPYSSSEEKDACLKALEKFAGKKLWPMLSAGSSFMSWYEHLSRTVCLIYCRNHRIWEWILKFITRKRDLSFLITDMTRHTHQSAWNSMHNVICGGTKFMDSYLKILTKSGVRINVIQGDRDQVVPMECIRELKLKAPNVEINIIPNADHSSMLLGREKKFAQSLEHIWTSSC 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03546 433 Pfam alpha/beta hydrolase fold 159 272 IPR000073 -
Vivi6g03546 433 SUPERFAMILY alpha/beta-Hydrolases 132 415 IPR029058 -
Vivi6g03546 433 Gene3D alpha/beta hydrolase 129 431 IPR029058 -
Vivi6g03546 433 PRINTS Alpha/beta hydrolase fold signature 233 246 IPR000073 -
Vivi6g03546 433 PRINTS Alpha/beta hydrolase fold signature 187 202 IPR000073 -
Vivi6g03546 433 PRINTS Alpha/beta hydrolase fold signature 247 260 IPR000073 -
Vivi6g03546 433 PANTHER HYDROLASE 133 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03546 Vivi-Chr6 128489447 128491988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03546 7 431 Acyl Lipid Metabolism Gene Families AT5G17780 50.116 8.49e-149 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03546 - - gmx:100775258 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03546 6 128489447 128491988 Vivi6g03546 6 128489447 128491988 ECH