Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03544 ATGATGGTCTCCAAGGTGCTTTTACAGAGAAGGCTCTTCAGGTTCTTGCAACAGTCAACACCCTCCTTATGCTCCTTTTCTTCTTCATCTTCTATTGATGGGTCTCCATTCCATTCTGTGAAAGCAACAGAAATCTCGGGTCTTTCAAGTTCTTTTAGAAGCTTCTGCTCTCAAAAGTCCAATCTTGTTGCTGAATCTCATGGCCCAGCACCTATTGATTACAGTTCCCTACTACAGGAGGCTGAGTTCCACAGACTGGCTGAGTCCACAATACAAGGCCTTCAAGAGAAATTTGAGGACTATGGAGACTCTATTGACCTTGATGGATTTGACATAGACTATGGGAATGATGTTTTGACTGTCAAACTTGGTGAGCTGGGCACCTATGTGTTGAATAAACAAACACCAAATAGACAACTTTGGCTGTCTTCGCCAGTGAGTGGTCCGTCTAGGTTTGATTGGGATCAGGATACTAAAGCTTGGGTTTATAGGCGAAACAAAGCAAAGTTATATAAAATTTTAGAAGATGAGTTGGAGCAGCTCTGTGGCAAACCTATTGTTCTTTCCTAA 570 0.4228 MMVSKVLLQRRLFRFLQQSTPSLCSFSSSSSIDGSPFHSVKATEISGLSSSFRSFCSQKSNLVAESHGPAPIDYSSLLQEAEFHRLAESTIQGLQEKFEDYGDSIDLDGFDIDYGNDVLTVKLGELGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQDTKAWVYRRNKAKLYKILEDELEQLCGKPIVLS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03544 189 ProSiteProfiles Frataxin family profile. 78 186 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 PANTHER FRATAXIN 42 188 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 Pfam Frataxin-like domain 78 185 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 Gene3D Frataxin/CyaY 72 189 IPR036524 GO:0008199|GO:0016226
Vivi6g03544 189 CDD Frataxin 78 186 - -
Vivi6g03544 189 PRINTS Frataxin signature 78 96 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 PRINTS Frataxin signature 131 146 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 PRINTS Frataxin signature 116 131 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 ProSitePatterns Frataxin family signature. 130 144 IPR020895 -
Vivi6g03544 189 FunFam Frataxin, mitochondrial 71 189 - -
Vivi6g03544 189 SMART Frataxin_Cyay_2 78 189 IPR002908 GO:0008199|GO:0016226
Vivi6g03544 189 NCBIfam frataxin 82 179 IPR017789 GO:0004322|GO:0005739|GO:0006879|GO:0018283
Vivi6g03544 189 SUPERFAMILY Frataxin/Nqo15-like 68 186 IPR036524 GO:0008199|GO:0016226
Vivi6g03544 189 NCBIfam iron donor protein CyaY 80 187 IPR002908 GO:0008199|GO:0016226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03544 K19054 - gmx:100815916 253.447