Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03508 ATGACTTACCTCTTAAGTTTGTTGATTGTAGATCCAAATGGGATGAGGGATGCAGTGAACTTGGAACATCATATTCACTATCTGGAAATTGAGGCTTACACTTCCATGTTGAAGGCTTTTATTGCTCAATCAGATCTTCTTACTTGGGGAAAAGAGGAGCTATTGACTGAACTACGAAAGGAACTAAATATTGCTGATTCTGAACATGGACAGATTCTGAGTAAAATAAATTCTGATGAGACAATTAGATGGATAAGGGAGCAAAGGAAAAGGGCATCTCATTCTCATGCTCAGGGTTATATTCAAACTAATACTTCTGGGTGTCATTCCGCCTCAATTGGAAATTCAGTTATAAGATTGAAAACTCCTTCTTTGGCTACATTTTATCCTCAGAATATATCGCACAGTCAAGCTTCTCTTAATTCTATTCATGTTTCTGCTCCAATGTCTGTCTATGGGAGTGTTGAGAAACCCAAGGAAATGTTCAATTATGATGTTCAGCTGCCACCTATTGGAAGAGGGAGTGTGCCGAAAGGGAATTATCAGTTTAAGCAGTACTGTCAACCATCCGAGAGTCTCACGTTAAACAACAGAGATAACATAATTGAGATTCGTGCAACAGATAGGGTTATCCATGATGTTGAAAAGATGCTTTTTGGTAGAGAGAAGCCTAGTCCAGTTGATATTGAGAATGCGAAACAGGCTCTTGATGAGCAAGAAAGAGCTATACTTGAAGCACTCGGTAAACTTGGTAAACTGGGAGACGTGTTAGACAGGGATGACAGGGTGCTGCGAAATCTCCAATCGAGGGCAAGAAATGACGGTCAATGGTAG 834 0.4005 MTYLLSLLIVDPNGMRDAVNLEHHIHYLEIEAYTSMLKAFIAQSDLLTWGKEELLTELRKELNIADSEHGQILSKINSDETIRWIREQRKRASHSHAQGYIQTNTSGCHSASIGNSVIRLKTPSLATFYPQNISHSQASLNSIHVSAPMSVYGSVEKPKEMFNYDVQLPPIGRGSVPKGNYQFKQYCQPSESLTLNNRDNIIEIRATDRVIHDVEKMLFGREKPSPVDIENAKQALDEQERAILEALGKLGKLGDVLDRDDRVLRNLQSRARNDGQW 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03508 277 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 21 111 IPR005491 -
Vivi6g03508 277 Pfam ENT domain 23 90 IPR005491 -
Vivi6g03508 277 SMART ENT_2 21 94 IPR005491 -
Vivi6g03508 277 SUPERFAMILY ENT-like 17 97 IPR036142 -
Vivi6g03508 277 Gene3D ENT domain 16 146 IPR036142 -
Vivi6g03508 277 PANTHER PROTEIN EMSY-LIKE 4 184 253 IPR033485 GO:0050832
Vivi6g03508 277 Coils Coil 229 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03508 Vivi-Chr6 127813080 127815500 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03508 - - ccaj:109802952 256.914