Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03492 ATGAAGGTCGTCGCACTTGTTAGCGGCGGCAAAGACAGTTGCTACGCCATGATGAAGTCTATTCACTACGGCCACGAGATTGTTGCGTTGGCGAATTTGATGCCGGTTGATGATTCCGTCGACGAGCTTGATAGCTACATGTTCCAAACGGTTGGGCATCAGATTATCATTAACTATGCCGAATGTATGGGATTGCCGTTGTTTAGGAGGCGAATACGAGGATCCTCAAGGCATCTAGAGCTTGGTTACAAAACAACTCAGGGTGATGAAGTTGAAGATATGTATATTTTATTACGGGAAGTGAAAAGGCAGATACCCTCAGTTACTGCTGTGTGTTCTGGAGCCATTGCGTCTGATTATCAGAGACTGCGGGTGGAAAGTGTGTGTTCGAGGTTAGGCCTTGTTTCTCTTGCATACTTATGGAAACAAGATCAGTCCTTGCTCCTCAATGAAATGATTTCAAATGGAATAGTAGCTATAACTGTGAAGGTAGCTGCCATGGGTTTGGATCCTGCGAAGCATTTGGGTAAAGAATTAGCCATGTTAAATGCTTATTTGCATAAATTGAAAGAGGCATATGGAATCAATGTTTGTGGTGAAGGAGGAGAGTATGAAACATTGACCTTAGATTGCCCGCTCTTTATTAATGCTCGCATTGTGCTCGACAAATATCAAGTTGTGATGCACTCTGCAGACTCCATAGCTCCCGTGGGAGTCCTTCATCCCTTGGCATTTCATTTGGAAAATAAGGCAGACGTTCAGTCTTTAAAGACAGTAGACAAAATACATGAGAGTTGTATGCAGAAACTAGGACCTGTGTTCGAAGTGCATGACAGTCTAGAAAGATTGGAAGCCGTATGTAAGCCTCTTGATTGCACTGATCAAATCAATGGTGTAGAACATAAATTTAAGATTTCAAGAACAAATAACAAAAGCACGTTCTCCATAGGTTGCTGGTTACAAGATTCATGCAATGCAGGTTTGCGGGAAGATTTAACAATTGTTTTGAGAAAAATTGAATCACAACTAGAAGGCTTTGGTTTTGGCTGGGAGAATGTTCTCTATATTCATCTTTACATTAATGACATGGATAAGTTCTCTGAGGCAAATGAGACATATGTGAAGTTTATAACACATGAGAAGTGCCCATTTGGCGTTCCATCCCGTAGTACAGTTGAAATGCCTCTAGTTGAAATGGATTTTAGTAGAGCATATATGGAAGTTTTGGTATCAAATAATAAAAATAAAAAGGTTTTACATGTACAAAGTATTTCCTGTTGGGCACCTAGTTGCATTGGGCCATACAGCCAGGCAACCTTACATGAGGGTATACTTCTCATGGCTGGTCAACTGGGGCTTGACCCTCCTACAATGAATCTTTGCAGTGGAGGCCCTGGGGCTGAACTGGAACAGGCACTAAAAAACAGTGAAGCAATAGCAAAATCTTTTAACTGTTCAATATCGACATCTGCAATTGGTTTTGTTATTTACTGTTCTAAAAATATCTCTTCATTGGATAGACTCGATATTGAGAAGAAACAAGAAACACTCCTCAGACAAATGAAGATATATGATTTACAGGAAGGCAAGAAGTACAAAGCATTAGAACCCATAACCCTTTATGTCCTTGTTCCTGATCTACCTAAAAGAGCATTTGTAGAAGTGAAGCCTATTCTTTATATCGAGGATGGTGCAGATGTAGAAATTGAGACCATAACAGAAAAACCTCATTCAAAGACATCATGTTATTGGGGTTTCAAGCAGGAAAATTGGCACGATTCTTGCATTCAGAAATGTGTGATCCCTGGAAAGATATGTGCCATTGTATTATCTATCACAAGTGAGCTTGCTGCAAAGATATGTTCTGATTCCCTGCCTGCTGATTATGTCAATGATAATGGTCAACATTCTTTACCTAAAGCACATATGGAGCAGTTATCAAAGTTCTGCATTTATCTTCTCGACAAAGCTATAACAGACAACAACTTCGTCTGGGAAGATATAATGAGTTTGAGGTTCTACATCCCGGTAAGCCTTCAAATGTCAGTCGAGCTAATACAACCTATGTTCAGCAATGCACTTTTCGAACTCTCTGAAATGAATCAAAAGAAAGTTAAAAATTGCGAGGAGCCGATCTTCAACATAGTTCCTGTCATAGGTGCCGGGCAGTCTGCTTCATCCATGGACAATGTAGTGACCTGCGAATTACTAGCTCATAAATCCTGA 2226 0.403 MKVVALVSGGKDSCYAMMKSIHYGHEIVALANLMPVDDSVDELDSYMFQTVGHQIIINYAECMGLPLFRRRIRGSSRHLELGYKTTQGDEVEDMYILLREVKRQIPSVTAVCSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQSLLLNEMISNGIVAITVKVAAMGLDPAKHLGKELAMLNAYLHKLKEAYGINVCGEGGEYETLTLDCPLFINARIVLDKYQVVMHSADSIAPVGVLHPLAFHLENKADVQSLKTVDKIHESCMQKLGPVFEVHDSLERLEAVCKPLDCTDQINGVEHKFKISRTNNKSTFSIGCWLQDSCNAGLREDLTIVLRKIESQLEGFGFGWENVLYIHLYINDMDKFSEANETYVKFITHEKCPFGVPSRSTVEMPLVEMDFSRAYMEVLVSNNKNKKVLHVQSISCWAPSCIGPYSQATLHEGILLMAGQLGLDPPTMNLCSGGPGAELEQALKNSEAIAKSFNCSISTSAIGFVIYCSKNISSLDRLDIEKKQETLLRQMKIYDLQEGKKYKALEPITLYVLVPDLPKRAFVEVKPILYIEDGADVEIETITEKPHSKTSCYWGFKQENWHDSCIQKCVIPGKICAIVLSITSELAAKICSDSLPADYVNDNGQHSLPKAHMEQLSKFCIYLLDKAITDNNFVWEDIMSLRFYIPVSLQMSVELIQPMFSNALFELSEMNQKKVKNCEEPIFNIVPVIGAGQSASSMDNVVTCELLAHKS 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03492 741 Gene3D HUPs 1 157 IPR014729 -
Vivi6g03492 741 PANTHER DOMAIN OF UNKNOWN FUNCTION 71 DUF71 -CONTAINING PROTEIN 1 738 IPR030662 -
Vivi6g03492 741 Gene3D - 160 256 - -
Vivi6g03492 741 Pfam Diphthamide synthase 1 230 IPR002761 -
Vivi6g03492 741 SUPERFAMILY YjgF-like 417 563 IPR035959 -
Vivi6g03492 741 FunFam Diphthine--ammonia ligase 159 255 - -
Vivi6g03492 741 CDD eu_AANH_C_2 435 559 - -
Vivi6g03492 741 FunFam Endoribonuclease 291 411 - -
Vivi6g03492 741 FunFam Endoribonuclease 412 560 - -
Vivi6g03492 741 SUPERFAMILY YjgF-like 326 397 IPR035959 -
Vivi6g03492 741 Gene3D - 306 409 IPR035959 -
Vivi6g03492 741 CDD Alpha_ANH_like_IV 2 214 IPR002761 -
Vivi6g03492 741 Pfam Endoribonuclease L-PSP 428 557 IPR006175 -
Vivi6g03492 741 Pfam Endoribonuclease L-PSP 328 400 IPR006175 -
Vivi6g03492 741 Gene3D - 410 573 IPR035959 -
Vivi6g03492 741 FunFam diphthine--ammonia ligase 1 158 - -
Vivi6g03492 741 NCBIfam diphthine--ammonia ligase 1 230 IPR002761 -
Vivi6g03492 741 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03492 Vivi-Chr6 127624108 127630158 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03492 K06927 - gmx:100807009 1240.33