Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03478 ATGGCTCTTCATCATGTTGCACTCATTGCAATTTCCATGGTTTTGCTTTCTTCTGTTGCCATAGCAACGGATCACATTGTAGGTGATGACAAGGGTTGGACTGTTGACTTTAATTATACTCAATGGGCTCAAGACAAAGTTTTTCGTGTCGGTGACAACCTTGTGTTCAATTATGACAATACAAAGCACAACATCTTCAAAGTGAATGGTACACTCTTTCAAAACTGCACTTTTCCACCAGAGAATGAAGCAATTTCCACTGGAAAAGATGTTATTCAATTGAAAACTGAAGGAAGAAAATGGTACATTTGTGGGAAGGCTGATCATTGTGTTGCCCGTCAAATGAAGCTTGTCATCACTGTTCTTGCAGACGGCGCGCCTGCTCCTTCCCCTCCTCCATCCTCCGATGCTCATTCTACTGTGTCATTTGTGTTTGGGATCGTCATGGCTGCTATAGTGGCCATGGCTACCATTTTTGCTTAA 483 0.4244 MALHHVALIAISMVLLSSVAIATDHIVGDDKGWTVDFNYTQWAQDKVFRVGDNLVFNYDNTKHNIFKVNGTLFQNCTFPPENEAISTGKDVIQLKTEGRKWYICGKADHCVARQMKLVITVLADGAPAPSPPPSSDAHSTVSFVFGIVMAAIVAMATIFA 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03478 160 Pfam Plastocyanin-like domain 33 112 IPR003245 GO:0009055
Vivi6g03478 160 Gene3D - 20 124 IPR008972 -
Vivi6g03478 160 SUPERFAMILY Cupredoxins 22 122 IPR008972 -
Vivi6g03478 160 PANTHER BLUE COPPER PROTEIN 20 134 IPR039391 GO:0009055
Vivi6g03478 160 FunFam Cupredoxin superfamily protein 21 126 - -
Vivi6g03478 160 CDD Phytocyanin 23 121 - -
Vivi6g03478 160 ProSiteProfiles Phytocyanin domain profile. 23 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03478 Vivi-Chr6 127339756 127340335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03478 8 142 Miscellaneous Gene Families AT2G32300 34.286 9.85e-23 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03478 - - psat:127129120 226.868
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03478 6 127339756 127340335 Vivi6g03478 6 127339756 127340335 ECH