Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03475 ATGGATAGCAAGCATGCATATAAACAACGGTCTTATGAGGATTTTGATCCTATTTTTAAATGGCGTAGAGAACTAGACCGTGACACCGTTGAACTTCATCTTCCAGGTTTTAAGAGAGAACAAATGAGGATTCAGGTGAACCATCATGGTTTTTTGGTGATAAGTGGAGAACGTCCACATGATGGAACAACATGGAAACGTTTTAAGAAAGAGTTTGAGATTCCAAAATATTGCAATGAAGATGCTATCCGTGGCAATTTCATGCAGAATATTCTTTCTGTGGTAATGCCAAAGAGAGTTGATCTAATACCTCAAGAGGAGCAAGTCCAAGAAATGCCGGAACTTGAAGACGACGATGAATATCAAGAGAAAGCTTCGTATAAGAGCTTAAAATTTGGAGGAAGAAGTGGAGAAGAAGAGAGTGAAAAGAGAGATAAAGAGAGACTATATGAATATGCTGACACAAGAGAAAACCAATTTGGAGAAAATGATGTAGAAACTACTAGAGATGTTGCTTTTAAATTCATGGTTGTGATTATTGTTGTCATGGTTATTGTAAATTATCTAGTTGATATGAGCAAAAGCCTCATGGGTGAAGCTCATTCCTATTTTCAAAATTAG 621 0.3655 MDSKHAYKQRSYEDFDPIFKWRRELDRDTVELHLPGFKREQMRIQVNHHGFLVISGERPHDGTTWKRFKKEFEIPKYCNEDAIRGNFMQNILSVVMPKRVDLIPQEEQVQEMPELEDDDEYQEKASYKSLKFGGRSGEEESEKRDKERLYEYADTRENQFGENDVETTRDVAFKFMVVIIVVMVIVNYLVDMSKSLMGEAHSYFQN 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03475 206 PANTHER HEAT SHOCK PROTEIN 26 12 138 - -
Vivi6g03475 206 Pfam Hsp20/alpha crystallin family 26 106 IPR002068 -
Vivi6g03475 206 Gene3D - 2 101 IPR008978 -
Vivi6g03475 206 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 9 118 IPR002068 -
Vivi6g03475 206 SUPERFAMILY HSP20-like chaperones 12 108 IPR008978 -
Vivi6g03475 206 CDD ACD_sHsps-like 26 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03475 Vivi-Chr6 127326687 127327750 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03475 - - pvu:PHAVU_001G113500g 211.075