Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03457 ATGTCCACCGATCCAAACCACTCCCAAATGGCTCTAATTCTCGGCCCCGATTCCTCCCACTTAGAATCCCTAATCACAAACCTCATGTCCTCCTCCAACGACCTCCGTTCCCAAGCCGAAAATCTCTTCAACCTATGCAAACAAACCTACCCCGATTCCCTAATTCTCAAACTCTCCCAACTCCTCCATACTTCCCCTAACCCCGAAACTCGCACCATGTCAACCATCCTCCTCCGCCGCCACCTCACGCGCCACCACGACGACTCCTTTATCTACCCACACCTTACTCCTTCCACTCAATCCACTCTCCGTTCCATCCTCCTCTCCTCTCTCCATCAAGAGCCTGTCAAATCAATTGCCAAGAAGCTATGCGACACGGTTTCTGAACTTGCTTCTGCGCTTCTCTCCGATGACCTTGCTTCGTGGCCGGACCTGCTTCCGCTGCTCTTCCAGTGGGTTACTTCGCCTGACGCTAGGCTTCAGGAGATTTCGCTACTTGTGTTTGCTCAATTGGCTCATTACATAGGTGAAACCCTAATTCCGCAATTGTCTACTCTCCACTCTGTTTTCCTCCGTAGCCTCAGCGCTGCCACCTCCTCGTCAGATGTCCGCATCGCCGCTCTTGCCGCCAGTATCAATTTTGTTCAGTGTCTCTCTAATCCATCCGACCGTGACAGGTTCCAAGATTTGCTTCCTCTGATGATGCAGACATTGACAGAGGCATTGAATTCTGGTCAGGAGGCGACTGCACAGGATGCACTAGAACTCCTCATTGAGCTTGCAGGGACCGAGCCACGTTTCCTGCGGAGGCAGATTGTTGACGTTGTTGGTGCCATGCTGCAAATCAGTGATGCCGAGTCGTTGGAAGAAGGGACTCGCCATTTGGCTATTGAGTTTGTTGTTACCCTTGCTGAGGCGAGGGAGCGTGCTCCTGGGATGATGAGGAAGTTGCCACAGTTTGTGAAAAAGCTATTTGGTGTGCTGATGAATTTGTTGCTGGATATTGAGGATGCTGCTGCTTGGCATGCTGCGGTGTCTGAAGATGAGGATGCTGGTGAGACTAGTAACTACGGATTTGGACAGGAATGTTTGGATAGGCTTTCAATTTCTTTGGGTGGGAACACTATAGTTCCAGTTGCATCTGAGCTGTTGCCGACTTACTTGTCTGCACCTGAATGGCAAAAGCGCCATGCTGCACTCATTGCCTTTGCACAAATTGCCGAGGGTTGTTCCAAGGTGATGACAAAGAATCTGGAGCATGTATTGTCAATGGTTTTGAATTCATTTCCTGATCCAAATCCTCGGGTGCGGTGGGCGGCTATAAACGCTATTGGACAGTTGTCCACAGATTTGGGACCAAACTTGCAGATTAATTATCATCACTTAGTGCTCCCTGCATTAGCGGGAGCCATGGATGATTTTCAAAATCCTCGTGTACAGGCTCATGCAGCTTCTGCAGTGCTAAATTTTACTGAGAATTGCAACCCAGATATTCTAATACCTTATTTGGATGGGATTGTGAGCAAACTTCTTGTACTCCTTCAGGGTGGAAACCAGATGGTTCAAGAAGGTGCTTTGACAGCATTAGCATCTGTTGCTGATTCTTCACAGGAGAAATTTCAGAAGTATTACGACACTGTAACCCCATACCTAAAAGCTATTTTGTTGAATGCAAATGATAAATCTAGTCGTATGCTTCGTGCCAAAGCAATGGAGTGTATTAGTTTGGTAGGAATGGCTGTTGGAAAGGAGAAGTTCAGGGATGATGCCAAGCAGGTCATGGATGTCTTGATGTCACTGCAACAATCTCAACTGGATGCTGATGATCCAACTGCAAGCTACATGTTACAAGCATGGGCGCGACTTTGCAAGTGCCTCGGGCAGGATTTTCTCCCATATATGGGATTTGTCATGCCTCCCTTGCTTCAATCTGCACAACTTAAGCCTGATGTGACAATTACATCAACAGATTCTGATGCTGAATTTGATGAAGAGGATGACAGCATTGAAACCATCACTCTTGGGGACAAAAGGATAGGCATTAAGACCAGTGTCCTGGAGGAGAAGGCTACAGCATGTAACATGTTATGTTGCTATGCTGATGAGTTGAAGGAAGGTTTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTTCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAAGCAGCTGTTTCAGCTATGCCAGAACTGCTGTCTTCAGCAAAATTGGCTATAGAGAAGGGGCAGTCACAAGGCCGTGATGCAACTTACTTAAAACAATTGTCTGATTATATAATTCCAAATTTGGTGGAAGCTTTACACAAGGAGCCAGAAGTAGAAATTTGTGCAAGCATGTTGGATGCACTGAATGAATGCATACAGGTCTCAGGAGCACATCTAGATGAAAAGCAAGTAAGGAGCATTGTTGATGAGATTAAACAAGTCATCACTGCCAGTTCATCCAGAAAGCATGAAAGAGCAGAGAGAGCCAAAGAAGAGGACTTTGATGCCGAAGAAAGAGAACTACTCAAGGAGGAAAATGAGCAGGAAGAAGAACTTTTTGATCAAATTGGTGATTGCTTGGGGACGTTGATAAAAACATTCAGAGCATCATTTTTGCCTTTCTTTGAAGAGCTTTCGTCATACCTAACACCTATGTTTGGCAAAGACAAAACCTCAGAGGAAAGGAGAATTGCCATATGTATATTTGATGATATTGCTGAGCACTGCCGCGAAGCAGCTCTTAAATATTATAATTCATTTCTTCCATTCTTGCTCGAAGCTTGCAACGATGACTGTTCAGATGTTCGACAGGCAGCTGTTTATGGGGTTGGTGTATGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCAAGGTTAAATGCTGTAATAACACATCCGAATGCACGGGATTCTGATAATGTTATGGCATATGATAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAGCCCAGGTTGTTCCGGCCTGGCTAAGTTGCTTGCCTATAAAAGGTGATTTAATTGAGGCTAAAGTTGTACATGACCTACTTTGCTCAATGGTCGAAAGATCTGATAGAGAACTTATAGGTCAAAACAATCAATATCTTCCCAAGATTGTTACAATTTTTGCCGAGATATTATGTGCGGGAACTGATCTGGCAACAGAACAAACTGTAAGTCGGATGATTAATTTATTAAGGCAACTTCAACAGACTTTGCCACCGTCTACCCTTGCTTCAACCTGGTCATCATTGCACCCTCAGCAACAGCTTGCACTTCAGTCCATTCTATGA 3348 0.4516 MSTDPNHSQMALILGPDSSHLESLITNLMSSSNDLRSQAENLFNLCKQTYPDSLILKLSQLLHTSPNPETRTMSTILLRRHLTRHHDDSFIYPHLTPSTQSTLRSILLSSLHQEPVKSIAKKLCDTVSELASALLSDDLASWPDLLPLLFQWVTSPDARLQEISLLVFAQLAHYIGETLIPQLSTLHSVFLRSLSAATSSSDVRIAALAASINFVQCLSNPSDRDRFQDLLPLMMQTLTEALNSGQEATAQDALELLIELAGTEPRFLRRQIVDVVGAMLQISDAESLEEGTRHLAIEFVVTLAEARERAPGMMRKLPQFVKKLFGVLMNLLLDIEDAAAWHAAVSEDEDAGETSNYGFGQECLDRLSISLGGNTIVPVASELLPTYLSAPEWQKRHAALIAFAQIAEGCSKVMTKNLEHVLSMVLNSFPDPNPRVRWAAINAIGQLSTDLGPNLQINYHHLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCNPDILIPYLDGIVSKLLVLLQGGNQMVQEGALTALASVADSSQEKFQKYYDTVTPYLKAILLNANDKSSRMLRAKAMECISLVGMAVGKEKFRDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSTDSDAEFDEEDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKLAIEKGQSQGRDATYLKQLSDYIIPNLVEALHKEPEVEICASMLDALNECIQVSGAHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEERELLKEENEQEEELFDQIGDCLGTLIKTFRASFLPFFEELSSYLTPMFGKDKTSEERRIAICIFDDIAEHCREAALKYYNSFLPFLLEACNDDCSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNARDSDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPIKGDLIEAKVVHDLLCSMVERSDRELIGQNNQYLPKIVTIFAEILCAGTDLATEQTVSRMINLLRQLQQTLPPSTLASTWSSLHPQQQLALQSIL 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03457 1115 ProSiteProfiles HEAT repeat profile. 421 459 IPR021133 -
Vivi6g03457 1115 Pfam HEAT repeats 387 486 - -
Vivi6g03457 1115 Pfam Importin repeat 6 786 889 IPR041389 -
Vivi6g03457 1115 Pfam Importin-beta N-terminal domain 50 111 IPR001494 GO:0006886|GO:0031267
Vivi6g03457 1115 Pfam HEAT repeat 925 953 IPR000357 GO:0005515
Vivi6g03457 1115 SUPERFAMILY ARM repeat 20 956 IPR016024 -
Vivi6g03457 1115 SMART TOG_3 370 611 IPR034085 -
Vivi6g03457 1115 Pfam Importin repeat 287 378 IPR041653 -
Vivi6g03457 1115 Gene3D - 17 1115 IPR011989 -
Vivi6g03457 1115 PANTHER IMPORTIN BETA 24 1089 IPR040122 GO:0006606
Vivi6g03457 1115 Coils Coil 832 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03457 Vivi-Chr6 126986412 126995890 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03457 K20222 - gmx:100797431 1903.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03457 6 126986412 126995890 Vivi6g03457 6 126986412 126995890 ECH