Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03425 ATGGCTGAAATTTTGATCAAGACTAGCTTGGTTTCTTCTTGGCATGGAAACAGAAATCAACAACTTCAAAGGGCTTCCATGGTTCCATCTTTGAAGCTGAAATCTCAGTTTCTCAGATCTTCTTTTTCATCTGAGTTTCATGGCAAAAAGGCTATCTTTCGTGTAAATAGATCAATACCTAAAAGGGTCAATTCACAGTTTTCAGTTTCTGCTGCTCCTAAGATGACACTTAGAATAGGGAAAGCTCAGAAATGGTGGGAAAAGGGTCTTCAGCCTAACATGAGAGAGGTGACTTCAGCACAAGATCTTGTAGATTCACTTTTAAACGCAGGGGACAAGCTTGTGATTGTTGATTTTTTCTCTCCTGGTTGTGGTGGATGCAAAGCCCTTCATCCTAAGATATGTCAATTTGCTGAGATGAATCCTGATGTTGAGTTCCTTTCTGTGAACTATGAGGAGCATAAATCCATGTGTTACAGCCTTAGTGTTCATGTGCTTCCTTTCTTCCGGTTCTATAGAGGCGCGCAGGGTCGCGTATGCAGCTTTAGCTGCACCAATGCCACGATCAAGAAGTTTAGAGATGCATTGGCGAAACACACTCCAGAAAGATGCAGCTTGGGGCCAACCAAAGGGTTAGAGGAGAAAGAGCTCATAGCTCTATCTCAAAACAAAGATCTTTCCTTTACATACACACCTCAACCTCTGCCTGCAAATGAAGAGTTGGGGACCGAAGCTGTCCCTGCGAGTTCAGAGTCGCTTCCTTTACAGTCATTGACGTCGAATTCTGAATCGTTGGAGAGAACTCTAACCAGTGCTGGAAGATGA 825 0.4327 MAEILIKTSLVSSWHGNRNQQLQRASMVPSLKLKSQFLRSSFSSEFHGKKAIFRVNRSIPKRVNSQFSVSAAPKMTLRIGKAQKWWEKGLQPNMREVTSAQDLVDSLLNAGDKLVIVDFFSPGCGGCKALHPKICQFAEMNPDVEFLSVNYEEHKSMCYSLSVHVLPFFRFYRGAQGRVCSFSCTNATIKKFRDALAKHTPERCSLGPTKGLEEKELIALSQNKDLSFTYTPQPLPANEELGTEAVPASSESLPLQSLTSNSESLERTLTSAGR 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03425 274 FunFam Thioredoxin-like 1-2, chloroplastic 83 201 - -
Vivi6g03425 274 Pfam Thioredoxin 105 180 IPR013766 -
Vivi6g03425 274 ProSiteProfiles Thioredoxin domain profile. 66 201 IPR013766 -
Vivi6g03425 274 SUPERFAMILY Thioredoxin-like 83 199 IPR036249 -
Vivi6g03425 274 CDD TRX_family 110 197 - -
Vivi6g03425 274 Gene3D Glutaredoxin 86 205 - -
Vivi6g03425 274 PANTHER THIOREDOXIN, MITOCHONDRIAL 41 232 - -
Vivi6g03425 274 MobiDBLite consensus disorder prediction 233 274 - -
Vivi6g03425 274 MobiDBLite consensus disorder prediction 249 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03425 Vivi-Chr6 126416621 126418567 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03425 - - vra:106753897 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03425 6 126416621 126418567 Vivi6g03425 6 126416621 126418567 ECH