Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03362 ATGTTCTCACAAATTGCGTTCAATCCAATTCTCTGTGCAACTCCACCATCGTTGAACGAGAAGAAGAAAATTCCGTTTTGTTCTTCTTCTTCTGGTTCTCTTCTCTGTAACATCGATTGTGTAAGTGGAAGAACGAATTCGATGGCTTCGAATCATAGAACTAACAATTACTTACGCCATTTGGAATCGATGAAGATTCTTCCATCTGGTGCTGGTAGAATTCCTCATCTGAATGCTGTTATTCTCGGTGAAAGTCTTGCTACCGAAGAAGAAGATTATGTTCTTCCTAGCGAAGAATTCGCTTCCAAAGCACATGTTCAGTCACCGGAACAGTATTTGGAGATGTATAAGAGATCCATTGAAGATCCTGCTGGATTTTGGTCTGAAATTGCATCTGATTTCTACTGGAAACAAAAATGGGGTGATCAAGTTTATAGTGAAAATTTGGATGTCACAAAAGGAAATATTAACATTGAGTGGTTCAAGGGTGGGATCACGAACATCTGTTATAATTGTGTGGATAGACATGTTGAAGCTGGACTTGGTGACAAAGTTGCGTTTTACTGGGAAGGGAATGAGATTGGTGTTGATGCTACTTTAACATATGCGCAGCTTCTTGAACAAGTTTGCCAGGTTGCAAACTATCTGAAAGATCTTGGTGTCAAAAAGGGGGATGCTGTGATTATTTATTTGCCCATGCTTATGGAGCTTCCTATCACAATGCTTGCTTGTGCTCGCATTGGTGCTGTTCATTCGGTTGTATTTGCCGGTTTTTCTTCAGAATCTCTTTCGCAGAGAATCATTGATTGTAAGCCAAAAGTTGTAATTACTTCCAATGCTGTTAAGAGGGGCTCTAAGGTTATCTATCTTAAAGACATCGTTGATTCTGCCATCAATGATTCAGCTAAAAATGGGGTCTCTATAGATGTTTGCCTTACTTATGACAACACATTAGCCTTGACGAGGAAGGATACAAAATGGAAGGAAGGGCGAGATATATGGTGGCAGGATGTCATTCCCAAATATCCAACCACTTGTCCAGTGGAGTGGCTTGATGCTGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACCGGAAAACCTAAGGGTGTCGTCCATACAACTGGTGGTTATATGGTATACACTGCAACAACATTTAAGTATGCATTTGATCACAAACCATCTGATGTCTACTGGTGCACAGCGGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATACTCAATGGTGCAACTGTTGTTCTGTATGAAGGGGCTCCCAATTATCCTGATGCTGGGCGTAGTTGGAACATTATTGATAAATTTAAAGTATCAATATTCTACACTGCCCCTACATTGGTGCGGTCCCTCATGCAATATGGTGATGAGCATGTTACCCGCTACTCAAGGAAATCTTTACGAGTACTGGGAAGTGTAGGCGAGCCCATAAATCCAAGTGCATGGAGATGGTTTTACAATGTCGTTGGAGATTCAAGATGCCCTATCTCTGACACTTGGTGGCAAACAGAAACTGGTGGCTTCATGATAACTCCACTACCTGGTGCTTGGCCCCAGAAGCCTGGTTCTGCTACTTGCCCTTTCTTTGGAGTCGAGCCTGTCATAGTGGATGAGAAAGGTGTTGCGTTAGAAGGAGAGTGTAGTGGTTACTTGTGTGTTAAGAGATCATGGCCAGGGGCATTCAGAACTTTGTATGGCGATCATGAACGATATGAAACAACATATTTCAAGCCCTTTGCTGGCTACTATTTCAGTGGTGATGGCTGCAGCAGGGATAAAGATGGATACTATTGGCTTACTGGGAGAGTTGACGACGTCATTAATGTCAGTGGCCATCGTATTGGGACAGCTGAAGTAGAATCAGCTCTAGTTTCACATCCAAAATGTGCTGAAGCAGCCGTTGTAGGCGTGGAGCACGAGGTTAAAGGACAGAGTATATATGCTTTTGTTACTCTTGTGGACGGTGTTCCATACAGTGAAGAACTGCGTAAGGACCTCGTACTCACAGTTCGAAAGCAGATAGGAGCGTTTGCAGCACCTGACAAAATCCACTGGGCACCTGGGCTCCCAAAAACAAGGAGCGGAAAGATAATGAGAAGAATTCTTAGAAAAATTGCGTCGAGGCAGCTAGATGAACTCGGAGATACAAGTACCATTGCAGAGCCACAAGTGGTCAACCAACTTATTGAACTTATTGATTCATGA 2238 0.4285 MFSQIAFNPILCATPPSLNEKKKIPFCSSSSGSLLCNIDCVSGRTNSMASNHRTNNYLRHLESMKILPSGAGRIPHLNAVILGESLATEEEDYVLPSEEFASKAHVQSPEQYLEMYKRSIEDPAGFWSEIASDFYWKQKWGDQVYSENLDVTKGNINIEWFKGGITNICYNCVDRHVEAGLGDKVAFYWEGNEIGVDATLTYAQLLEQVCQVANYLKDLGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSSESLSQRIIDCKPKVVITSNAVKRGSKVIYLKDIVDSAINDSAKNGVSIDVCLTYDNTLALTRKDTKWKEGRDIWWQDVIPKYPTTCPVEWLDAEDPLFLLYTSGSTGKPKGVVHTTGGYMVYTATTFKYAFDHKPSDVYWCTADCGWITGHSYVTYGPILNGATVVLYEGAPNYPDAGRSWNIIDKFKVSIFYTAPTLVRSLMQYGDEHVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATCPFFGVEPVIVDEKGVALEGECSGYLCVKRSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHPKCAEAAVVGVEHEVKGQSIYAFVTLVDGVPYSEELRKDLVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTIAEPQVVNQLIELIDS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03362 745 Hamap Acetyl-coenzyme A synthetase [acs]. 89 743 IPR011904 GO:0003987|GO:0016208|GO:0019427
Vivi6g03362 745 FunFam Acetyl-coenzyme A synthetase 92 615 - -
Vivi6g03362 745 NCBIfam acetate--CoA ligase 107 741 IPR011904 GO:0003987|GO:0016208|GO:0019427
Vivi6g03362 745 Pfam AMP-binding enzyme 180 620 IPR000873 -
Vivi6g03362 745 Gene3D - 91 615 IPR042099 -
Vivi6g03362 745 FunFam Acetyl-coenzyme A synthetase 616 745 - -
Vivi6g03362 745 Gene3D - 616 744 IPR045851 -
Vivi6g03362 745 PANTHER ACETYL-COENZYME A SYNTHETASE 96 741 - -
Vivi6g03362 745 CDD ACS 110 732 - -
Vivi6g03362 745 Pfam Acetyl-coenzyme A synthetase N-terminus 112 172 IPR032387 -
Vivi6g03362 745 ProSitePatterns Putative AMP-binding domain signature. 359 370 IPR020845 -
Vivi6g03362 745 Pfam AMP-binding enzyme C-terminal domain 629 707 IPR025110 -
Vivi6g03362 745 SUPERFAMILY Acetyl-CoA synthetase-like 98 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03362 Vivi-Chr6 125297531 125303885 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03362 54 744 Acyl Lipid Metabolism Gene Families AT5G36880 81.910 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03362 K01895 - gmx:100789257 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03362 6 125297531 125303885 Vivi6g03362 6 125297531 125303885 ECH