Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03345 ATGAAGAACAAAACAGCAAAGTTGTTGAAGCAAATCATAGCCGGTTTAACCTCAATGACAAAGTCAAAAACTATAGCTTTAAAGTCAAAAGTAAATGCCATCAAAGCTCGTTTGATTATATTCTCACTCATGAAGAACAAAAAGTTCCTCATGAGTTCAATCTCAGATAAATTCCACTCAATTTGGGGGAGCCATTCTCACCATCATTCCAAGGAAGATTGTCTAATTGAAGAAGGTGTCAATTGTGAAGATCATCATAGAGCCATGGTTATTTTTAACAACAATGTTCGCACTTACGAAGCGTTGCAAAATCCAAGTGAAACACGAGTCGTCGATGAACAAAATCAAGAAGATTACTATGATGATGGTGAGGATGATGATAAGTACCCTGATTTGACTCATACTCTTTTTGATTCTGAGGGTTTGGACTTTGGAGGATCAGTGATAGATAGGGTGAAGAATTGTAAGGAGGAAGCAGGGAAAGAGTTTAAGCTTGAAGATGATATTGATGAAGTTGCTGATCTATTTATCAGAAGGTTTAGAAGAAATATAATCTTGCAGAAACAAGATTCCTTGAAGAGGAAGAGGGAAGTTGAGCAAAATGGTACTTGA 612 0.366 MKNKTAKLLKQIIAGLTSMTKSKTIALKSKVNAIKARLIIFSLMKNKKFLMSSISDKFHSIWGSHSHHHSKEDCLIEEGVNCEDHHRAMVIFNNNVRTYEALQNPSETRVVDEQNQEDYYDDGEDDDKYPDLTHTLFDSEGLDFGGSVIDRVKNCKEEAGKEFKLEDDIDEVADLFIRRFRRNIILQKQDSLKRKREVEQNGT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03345 203 Pfam Cotton fibre expressed protein 166 195 IPR008480 -
Vivi6g03345 203 PANTHER EMB|CAB67623.1-RELATED 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03345 Vivi-Chr6 124914580 124992171 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03345 - - tpra:123889906 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03345 6 124914580 124992171 Vivi6g03345 6 124914580 124992171 ECH