Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03340 ATGGAGACACATTCATCTGTTGTAGCGAAAAGAATGTGGAATGTGTTAAGAATCGCGTTTTTTATGATGAGAAAAGGTTTTATATCAAAGAGGAAGATGATTATGGATATGAATTTGATGATGAAGAAAGGGAAAGTGCTAAGAAAATCATTGAGCAATCTAATGTCATCATCACAAAATCGTCACCGGAATAAAATCGGTGGTGGATTTATGGTGCATGATTATGAATTTTCTTGTAGTAATAGTCCAAATCCTGGTTATTTCAACCTCTCAAAACGTAAGCATCACTTCAATTTTCCTTGTATTAATTCTCCTGAGGTTATTGAAGATGAAACCTTACCTTGTTATCAATTGTCATCTCCACTTGAATTTGGAAGTGAAAATGTGTGTAAGGATAGTGTGGCTATTGTGCCTAAGACTCCTGAATATACATTCAATTTTAGGTTTGATTCATCTGAAGAGAGAAAAAGCCCACGTTTTTCTGTGAGGGTTTCTAATTATTCTGCATTGGAGGAAAATGAAGAGATTGGAAATTGTCAAGTTGATGATGAAGCTGAGGATTTCATTAGAAAGTTCTATGAACAGCTAAGGACGCAAAGCCGTGTGCAATTGCCGGGGTTTTGA 624 0.3574 METHSSVVAKRMWNVLRIAFFMMRKGFISKRKMIMDMNLMMKKGKVLRKSLSNLMSSSQNRHRNKIGGGFMVHDYEFSCSNSPNPGYFNLSKRKHHFNFPCINSPEVIEDETLPCYQLSSPLEFGSENVCKDSVAIVPKTPEYTFNFRFDSSEERKSPRFSVRVSNYSALEENEEIGNCQVDDEAEDFIRKFYEQLRTQSRVQLPGF 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03340 207 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 5 203 - -
Vivi6g03340 207 Pfam Cotton fibre expressed protein 180 200 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03340 Vivi-Chr6 124853393 124854404 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03340 - - gmx:100790324 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03340 6 124853393 124854404 Vivi6g03340 6 124853393 124854404 ECH