Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03338 ATGGAATCCAGTTTCATAAACCTAAAGCTCATTTCATGCAAAGACATTCACGCCTTCAACTTCTTCCAAAAACTAACCCTCTACGCACAAGCCTCAATCTCCTCCAACAACCCCAGAATCCAACTCAACGAAAAAAACACGCAGCAACAACGAACACCAACACACAGAAACCCCGAAGAAGACGGAACCAACCCCGAATGGAACCATGACATGCGTTTCGATTTATCTTTTCTCTCCTCACATTCAGATCCAACCGAGTTTTTCATTTGTTTCGAGTTTCGTCACGACGGCGTCATCCTCGGGGACAAATTCATAGGCCAGAGCCGTGTTCCGATAACGGATCTGATTAACGATGTCGACGGTATCACGCGGTTTGTTAGTTACGAGATTCGTTCGGCTGAGGGAAAGCCGAACGGGATCTTCGATTTTTCGTATAAATTGGAGGGTGTTCAGAATCAATCGTCACAGATTCTCGATGGGAGAATCTCGGGATATCCTGTTCTGACTCCGGAGGATTGTGCTCCTGCTCCGGTGCAATATCCGATATCGGAAATCGAGAGACCGTGTTGTTATTCTGTTCCGGAGGGACCGTTTTACGCACCTGTTGCGGCGACGGCGCCGCCGCCTGTTTCATATCCGTTTGCCGGAGATTGTAATTATTATTATCCACCGCCGCAGCCGTCAATGTATCCGTATCCTCCTCCGCCTCCTCCGAGGGAGCGGCTTTACCCACCTATTGGGCCTGAGGCCCATTATTGGCAGTCCGGCCCGCATTTTGAAAACCGGTGGTGA 792 0.4949 MESSFINLKLISCKDIHAFNFFQKLTLYAQASISSNNPRIQLNEKNTQQQRTPTHRNPEEDGTNPEWNHDMRFDLSFLSSHSDPTEFFICFEFRHDGVILGDKFIGQSRVPITDLINDVDGITRFVSYEIRSAEGKPNGIFDFSYKLEGVQNQSSQILDGRISGYPVLTPEDCAPAPVQYPISEIERPCCYSVPEGPFYAPVAATAPPPVSYPFAGDCNYYYPPPQPSMYPYPPPPPPRERLYPPIGPEAHYWQSGPHFENRW 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03338 263 CDD C2_SRC2_like 6 143 IPR044750 GO:0006952
Vivi6g03338 263 Gene3D C2 domain 2 140 IPR035892 -
Vivi6g03338 263 MobiDBLite consensus disorder prediction 38 66 - -
Vivi6g03338 263 MobiDBLite consensus disorder prediction 38 53 - -
Vivi6g03338 263 Pfam C2 domain 7 115 IPR000008 -
Vivi6g03338 263 ProSiteProfiles C2 domain profile. 1 126 IPR000008 -
Vivi6g03338 263 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 118 IPR035892 -
Vivi6g03338 263 PANTHER INGRESSION PROTEIN FIC1 6 181 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03338 - K22733 tpra:123891712 351.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03338 6 124816093 124816884 Vivi6g03338 6 124816093 124816884 ECH