Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03337 ATGAAAGAGACGTCGTTATCCACCGCCTCCCCTCCACCGGAGTTAGAAGACGGATGCTCACGTCACGACGGCGACCGTTACGACATAAACGACGAAGGCGCTTCGTCCGATATCCTTTTACTGGACGATGAGGGCTTCCCGTCACAACTCCCTGGAGAAGACGCTTCACCAAACGAATCTGAGAAAAGCAGTTTCGCCGCCGATTTCTACCGCTCCGGATCCGATTGCTCGTCTCTGTTGACACCAGACGTTAACCGACACAGAGACCTCGCGCTCACGTTCACGCCTGATTCGTTATCTTCCGGGAAGAAACTGAAACAGGCCAATTTGTTTCAGATTTGGGGATTCAAGAGAAATGTTGCAGTTGGTTCTGTTGAATTTGAATCCAAACAAGGTGGTTATTGTGGTGATATAGGTGAGGGAAGTGTTTCATCTGAGAAGAAGAAGATTGTTACACCTGGAAGTTGGGGTTCGATTTTGGGTCACAAAGGGAAAGTGATTGAGAAATCAAATTCTTCTAGCAAGAGAAAGAGTTTTCATGGAGAGAGTAGGGTTACACGATCGTGTCCATTTTATAAGAAAATGCCAGGAACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTGTTGAGGGGTGCTCGGCTTACTTTCTTAGTCATTTCCATGCGGATCACTATGGAGGTCTTAGCAAGAAATGGTCACATGGTCCCATTTATTGCACTCCTCTTACCGGACGGCTAGTTAAAATGTGTCTCTATGTAAATCCTTCGTACATATGCCCTTTGGAATTTGACACTGAATATGTGATTGATGGTGTCAAAGTGACTTTGATAGATGCTAACCATTGCCCTGGTGCAGCTTTGATTCACTTTGAGCTCCCAAATGGACAATGTTATTTGCATACTGGGGACTTTAGAGCTTGTAAAATGATGCAAGACTACCATCTTTTTGTTAATAAACGTGTGAATGTACTATATCTCGATACTACGTATTGCAACCCAAAATACAAGTTTCCTTTCAAGGAAGATGTACTAAACTATGTTGTCAAAATTACAAAGAACCACCTCAAAACGCATCCCAGAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCACTCGGGGTAAAAATCTATGCAAATTCTTCAAGAAGAAGGATTTTGCTAGCTTATGATTGCCCTGACTATTCAGATAGGCTCTGTACAAATGGAAATAACACCCTTCTCCATGTTATGCCCATGTCATCTCTTAGAATTGAGACTTTGAAGGAATATTTGAAAACCTACAAGGACCAATTCACATCAGTATTAGCATTTCGTCCAACCGGTTGGACTTTTAGTGAGAAGATAGGCAATGATTTGGAACTAATTAAACCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCCTATAGTGAGCATTCCAGCTTCACAGAAATGCGAGATTTTGTTCAGTTTTTGAGGCCTGACAAGATAATTCCTACTGTGAATGTTGGCAATGCTGCTACTCGAGAAAAGATGCAATCTTACTTTCGAGACTGGTTGAAGGGATAA 1587 0.4209 MKETSLSTASPPPELEDGCSRHDGDRYDINDEGASSDILLLDDEGFPSQLPGEDASPNESEKSSFAADFYRSGSDCSSLLTPDVNRHRDLALTFTPDSLSSGKKLKQANLFQIWGFKRNVAVGSVEFESKQGGYCGDIGEGSVSSEKKKIVTPGSWGSILGHKGKVIEKSNSSSKRKSFHGESRVTRSCPFYKKMPGTNFTVDAFRYGCVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCTPLTGRLVKMCLYVNPSYICPLEFDTEYVIDGVKVTLIDANHCPGAALIHFELPNGQCYLHTGDFRACKMMQDYHLFVNKRVNVLYLDTTYCNPKYKFPFKEDVLNYVVKITKNHLKTHPRTLVVVGAYSIGKECVYLAISKALGVKIYANSSRRRILLAYDCPDYSDRLCTNGNNTLLHVMPMSSLRIETLKEYLKTYKDQFTSVLAFRPTGWTFSEKIGNDLELIKPVSKGNITIYGVPYSEHSSFTEMRDFVQFLRPDKIIPTVNVGNAATREKMQSYFRDWLKG 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03337 528 Gene3D - 196 507 IPR036866 -
Vivi6g03337 528 SUPERFAMILY Metallo-hydrolase/oxidoreductase 211 513 IPR036866 -
Vivi6g03337 528 Pfam DNA repair metallo-beta-lactamase 407 511 IPR011084 -
Vivi6g03337 528 MobiDBLite consensus disorder prediction 1 64 - -
Vivi6g03337 528 CDD SNM1A-1C-like_MBL-fold 180 334 - -
Vivi6g03337 528 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 185 519 - -
Vivi6g03337 528 SMART Lactamase_B_5a 107 336 IPR001279 -
Vivi6g03337 528 MobiDBLite consensus disorder prediction 16 32 - -
Vivi6g03337 528 FunFam DNA cross-link repair 1A 195 358 - -
Vivi6g03337 528 FunFam DNA cross-link repair 1A 337 485 - -
Vivi6g03337 528 Gene3D - 337 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03337 Vivi-Chr6 124805715 124809346 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03337 K15340 - gmx:100790844 779.63