Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03336 ATGAAAGAGACGTCGTTATCCACCGCCTCCCCTCCACCGGAGTTAGAAGACGGATGCTCACGTCACGACGGCGACCGTTACGACATAAACGACGAAGGCGCTTCGTCCGATATCCTTTTACTGGACGATGAGGGCTTCCCGTCACAACTCCCTGGAGAAGACGCTTCACCAAACGAATCTGAGAAAAGCAGTTTCGCCGCCGATTTCTACCGCTCCGGATCCGATTGCTCGTCTCTGTTGACACCAGACGTTAACCGACACAGAGACCTCGCGCTCACGTTCACGCCTGATTCGTTATCTTCCGGGAAGAAACTGAAACAGGCCAATTTGTTTCAGATTTGGGGATTCAAGAGAAATGTTGCAGTTGGTTCTGTTGAATTTGAATCCAAACAAGGTGGTTATTGTGGTGATATAGGTGAGGGAAGTGTTTCATCTGAGAAGAAGAAGATTGTTACACCTGGAAGTTGGGGTTCGATTTTGGGTCACAAAGGGAAAGTGATTGAGAAATCAAATTCTTCTAGCAAGAGAAAGAGTTTTCATGGAGAGAGTAGGGTTACACGATCGTGTCCATTTTATAAGAAAATGCCAGGAACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTGTTGAGGGGTGCTCGGCTTACTTTCTTAGTCATTTCCATGCGGATCACTATGGAGGTCTTAGCAAGAAATGGTCACATGGTCCCATTTATTGCACTCCTCTTACCGGACGGCTAGTTAAAATGTGTCTCTATGTAAATCCTTCGTACATATGCCCTTTGGAATTTGACACTGAATATGTGATTGATGGTGTCAAAGTGACTTTGATAGATGCTAACCATTGCCCTGGTGCAGCTTTGATTCACTTTGAGCTCCCAAATGGACAATGTTATTTGCATACTGGGGACTTTAGAGCTTGTAAAATGATGCAAGACTACCATCTTTTTGTTAATAAACGTGTGAATGTACTATATCTCGATACTACGTATTGCAACCCAAAATACAAGTTTCCTTTCAAGGAAGATGTACTAAACTATGTTGTCAAAATTACAAAGAACCACCTCAAAACGCATCCCAGAACTTTAGTGGTTGTTGGGGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCACTCGGGACTTTGAAGGAATATTTGAAAACCTACAAGGACCAATTCACATCAGTATTAGCATTTCGTCCAACCGGTTGGACTTTTAGTGAGAAGATAGGCAATGATTTGGAACTAATTAAACCTGTTTCCAAAGGAAATATCACGATATATGGGGTTCCCTATAGTGAGCATTCCAGCTTCACAGAAATGCGAGATTTTGTTCAGTTTTTGAGGCCTGACAAGATAATTCCTACTGTGAATGTTGGCAATGCTGCTACTCGAGAAAAGATGCAATCTTACTTTCGAGACTGGTTGAAGGGATAA 1452 0.4256 MKETSLSTASPPPELEDGCSRHDGDRYDINDEGASSDILLLDDEGFPSQLPGEDASPNESEKSSFAADFYRSGSDCSSLLTPDVNRHRDLALTFTPDSLSSGKKLKQANLFQIWGFKRNVAVGSVEFESKQGGYCGDIGEGSVSSEKKKIVTPGSWGSILGHKGKVIEKSNSSSKRKSFHGESRVTRSCPFYKKMPGTNFTVDAFRYGCVEGCSAYFLSHFHADHYGGLSKKWSHGPIYCTPLTGRLVKMCLYVNPSYICPLEFDTEYVIDGVKVTLIDANHCPGAALIHFELPNGQCYLHTGDFRACKMMQDYHLFVNKRVNVLYLDTTYCNPKYKFPFKEDVLNYVVKITKNHLKTHPRTLVVVGAYSIGKECVYLAISKALGTLKEYLKTYKDQFTSVLAFRPTGWTFSEKIGNDLELIKPVSKGNITIYGVPYSEHSSFTEMRDFVQFLRPDKIIPTVNVGNAATREKMQSYFRDWLKG 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03336 483 Gene3D - 384 440 - -
Vivi6g03336 483 Gene3D - 186 364 IPR036866 -
Vivi6g03336 483 FunFam DNA cross-link repair 1A 195 358 - -
Vivi6g03336 483 MobiDBLite consensus disorder prediction 1 64 - -
Vivi6g03336 483 Pfam DNA repair metallo-beta-lactamase 386 466 IPR011084 -
Vivi6g03336 483 SUPERFAMILY Metallo-hydrolase/oxidoreductase 211 468 IPR036866 -
Vivi6g03336 483 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 386 474 - -
Vivi6g03336 483 CDD SNM1A-1C-like_MBL-fold 180 334 - -
Vivi6g03336 483 SMART Lactamase_B_5a 107 336 IPR001279 -
Vivi6g03336 483 MobiDBLite consensus disorder prediction 16 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03336 Vivi-Chr6 124805709 124809348 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03336 K15340 - gmx:100790844 684.871