Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03295 ATGAGACAGCACAAGCAAGCACCAATCGCGGGACCGAAGATTGTGTATCTGCTGTGCGGCGCTGCATTCTTCTCCTTTCTCCTCTTCTCCATCCAATCCTCTTTCCTCACCGGCTCCTTCTATTCAGATCGAAACTCCGAATCGATTCGCGACTTGTTTCAGTTTCAGTCCAATGTTCAGCAATGTGTGGCAAATAGGGGGCTTGGACTCACTGCAGAAATTATTGACCATTGCACATTGGTTCTCAAGTACCCTGAAGGCACCAACAGTACTTGGTACAATCAGCAGTTTAAAAAATTTGAGCCTTTGGAATACACTTATGATGTGTGTGAGGCAATACTCTTGTGGGAACAGTATCGAAACATGACCACAGTGTTGACAAGAGAGTATCTTGACGTTCGGCCTGGTGGTTGGTTAGATTATGCTCCACTAAGGATAGCACAATTGGGGGCAAAGAACTGCTATAATAAGACTCTATGTGAAGAGCAACTTAATATATTATTACCTGCAAAACCCCCATTTCATCCAAGGCAGTTCCGTACGTGTGCTGTTGTTGGGAATTCTGGGGACCTTCTAAAGACAGAATTTGGGAAAGAAATTGATAGTCATGATGCTGTTTTTCGAGACAACGAGGCCCCTGTTAATGAGAAATATGCCAAATACGTTGGTCTTAAGAGGGACTTCCGTCTAGTTGTAAGAGGTGCTGCTCGTAACATGGTTCCTATTCTAAATGGGTCTGATAATGAGGTACTCATAATCAAAAGTCTGACACACAAAGAAATCAATGCAGTTATAAAGACTATACCAAATCCAGTCTATCTCTTTCAAGGTATTGTACTACGTCGAGGTGCCAAAGGAACTGGAATGAAGTCTATTGAATTAGCACTCTCTATGTGTGATATTGTTGATATATATGGTTTCACCGTTGATCCTGGATACACTGAATGGACAAGATACTTCTCTGATCCTAGGAAGGGACACAATCCACTTCAAGGCAGAGCATACTACCAACTTCTAGAATGTCTTGGGGTAATCAGGATTCACTCCCCCATGAGATCCAAGAGGAAGCAAGACTGGTCAGATGTGCCAAGTAGAGAAATGATAAGCCAAGCACATGCAGCAGCTTGGCGCTTGAGAAAGAGTTTGGCTGGTAAGGCTGGGGGTTTAGGACAATTTGGCAATTGTAAGGTGTGGGGCAATGTAGACCCAGACAAAAGTGGGCCTATCTCAGGCTCACCAGACATGAGTGATGTCAGGAAGAATTCAAATTATCAAAAATGGGAAGTCATGCCTTTGAAAAGTTTGAGGAAAGAAGCACAGGCTCACTATAAGCAAATGGAAGGGGTCTCGCAATATAAAATGGATGGCAATAAGTTGGATGATCTAGTGTGTGTGAGGCACTCCTTAAAATCGGACGTGTAA 1422 0.4332 MRQHKQAPIAGPKIVYLLCGAAFFSFLLFSIQSSFLTGSFYSDRNSESIRDLFQFQSNVQQCVANRGLGLTAEIIDHCTLVLKYPEGTNSTWYNQQFKKFEPLEYTYDVCEAILLWEQYRNMTTVLTREYLDVRPGGWLDYAPLRIAQLGAKNCYNKTLCEEQLNILLPAKPPFHPRQFRTCAVVGNSGDLLKTEFGKEIDSHDAVFRDNEAPVNEKYAKYVGLKRDFRLVVRGAARNMVPILNGSDNEVLIIKSLTHKEINAVIKTIPNPVYLFQGIVLRRGAKGTGMKSIELALSMCDIVDIYGFTVDPGYTEWTRYFSDPRKGHNPLQGRAYYQLLECLGVIRIHSPMRSKRKQDWSDVPSREMISQAHAAAWRLRKSLAGKAGGLGQFGNCKVWGNVDPDKSGPISGSPDMSDVRKNSNYQKWEVMPLKSLRKEAQAHYKQMEGVSQYKMDGNKLDDLVCVRHSLKSDV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03295 473 PANTHER SIALYLTRANSFERASE-LIKE PROTEIN 1 3 471 IPR044782 GO:0008373|GO:0009846|GO:0009860
Vivi6g03295 473 Gene3D Glycosyl transferase family 29 279 350 IPR038578 -
Vivi6g03295 473 Gene3D Glycosyl transferase family 29 145 273 IPR038578 -
Vivi6g03295 473 Pfam Glycosyltransferase family 29 (sialyltransferase) 167 239 IPR001675 GO:0006486|GO:0008373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03295 Vivi-Chr6 123754596 123761825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03295 64 344 Glycosyltransferase AT1G08660 87.544 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03295 - - gmx:100527382 823.542