Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03279 ATGAGTAGTTGGAGAAGCCTTCTTCTACGGATCGGCGATAAGAGCCCCGAATATGGACCTTCTTCCGACTTCAAAGACCACATTGAAACGTGTTTTGGTGCGCTTCGTCGTGAGCTCGAACACTCCGAAACTGAGATTTTGGAGTTCCTTCTTACATGCGCTGAGCAATTGCCTCACAAGATTCCGTTCTATGGAACCCTGATTGGGTTGATTAACTTGGAAAGTGAGGATTTTGTGAAAAGACTGGTGGAGAAAACTCATTCTAAATTTCAGGAAGCCTTAGATACTGGAAACTGCAATGGAATTCGTATTTTAACGAGGCTGATGACTGTTATGATGTGCAGTAAAGCTCTTCAACCAAACTCTCTAGTTGGTGTCTTTGAAACATTTTTGTCATCAGCTGCCACCACAGTAGACGAGGAAAAAGGGAATCCGTTATGGCAGCCATGTGCTGACTTTTATATAACTTGCATTTTATCATGCCTACCGTGGGGTGGGGCTGAACTTGTTGAGCAAATTCCTGAAGATATTGAGAGAGTAATGGTTGGTATAGAAGCTTATTTGAGCATCCGAAAGCATACTTCTGACACTGGTTTATCCTTTTTTGAGAATGATGATGAAATCGAGAGAGATATTAATAACAAGGATTTTTTGGAGGACTTATGGGATAGAATACAAGTTTTATCAAGCAATGGATGGAAAGTTGAAAGTGTTCCAAGACCCCATCTTTCCTTTGAAGCTCAGCTGGTTGCTGGGAAGTCTCATGAATTTGGGACAATAAGCTGCTCCAACTTACCAAACCCGCCTTCAGTTCCTTCTGGTGTATCTTTTGGTAAAGAGAAGCATGAGGCAGAATTAAAGTATCCTCAAAGAATACGACGGTTAAATATATTTCCTTCCAGTAAAATGGAGGATATGCAGCCTATAGATCGATTTGTGGTGGAAGAGTATCTCTTAGACGTGCTTCTGTATTTCAATGGCAGTCGAAAGGAATGTGCTTCTTTCATGGTTGGTCTGCCGGTTACCTTCAGATATGAGTACCTCATGGCTGAGACAATATTCTCTCAGCTGCTGATGCTTCCACAACCACCTTTCAAACCAGTGTATTACACACTGGTAATTATTGACCTCTGTAAGGCTCTTCCAGGAGCTTTTCCCGCAGTTGTTGCGGGAGCAGTTCGTGCTCTCTTTGAAAAGATTGCTGATTTGGATATGGAGTGCCGAACTCGACTAATCCTTTGGTTCTCACACCATTTATCAAACTTCCAGTTCATTTGGCCTTGGGAAGAGTGGGCTTATGTGTTAGATCTCCCTAGGTGGGCTCCTCAACGTGTTTTTGTTCAAGAAGTTTTGGAGAGGGAAGTTCGCTTGTCATACTGGGACAAAGTCAAACAGAGCATTGAAAATGCACCTGGCTTAGAAGAATTGCTTCCCCCAAAGGGTGGACCAAATTTCAATCTTGTTGCAGAAGATGGTAAAGAAAACAATGAACAATTGCTGTCTGGAAATCTCAACGACATGGTTAAAGGGAAGGCACCTGTCCGTGAAATTATCTCATGGATTGATGAAAGCGTGTCTTCAAATAATAGTCTAGAAGTTACACTCAGAGTTGTCATACAAACTCTTCTCAATATTGGATCCAAGAGTTTCACTCATTTGATAACTGTATTAGAAAGATATGGGCAAGTCATTGCTAAAATATGTCCAGATGAAGATAAGCAAATTATGCTGATAGCTGAAGTCGGTTCTTTCTGGAAGAGTAACACACAAATGACAGCAATAGCAATTGACCGAATGATGGGCTATCGGCTTATATCAAATTTGGCTATTGTGAGATGGGTCTTCTCTGAAGATAATGTTGAGCAATTTCATTTGTCAGATCGTCCATGGGAGGTTCTTAGAAATGCAGTAAGCAAAACATACAACCGTATTTCTGATCTAAGGAAAGAAATATCATCTCTTAAAAGGAATATTTCATCAGCTGAAGTAGCTGCCAATGAGGCGAAAACAGAGCTAGATGTCGCAGAGTCCAAACTAGCACTCGTGGACGGTGAGCCAGTTGTCGGTGACAATCCTGTAAGAATGAATAGATTGAAATCACGTGCTGAAAAAGCAAAGGAAGAGCTGGTATCTATACAAGATTCTATAGAAGCTAAAGAGGCTCTTCTTGCCCGAGCAACTGATGAAAATGAGGCATTGTTTCTCTTGTTGTTTAAAAGCTTCTCAAATGTATTGACTGATCGCCTTCCTAAGGGGGCTGGAGCTAGAACACTTCATGAATGGAAGTCTGCCCAAGTTGAAGAGATGGCAGTTGACCTCGAAGAACAGTCAACAATGGAAGTAGACACTGAGAATCAGATACCTCAAAACAGTCAGTCAAATGGTGGGAAGAAAAGTGTTGCTTATAATGTAGGTGAAAAGGAGCAGTGGTGTATCACTACTTTGAGTTATGTGAAGGCCTTTTCTAGGCAGTACGCTACTGAGATATGGGCCCATATTGAAAAGTTGGACGCAGAGGTATTGACAGAAGATGCACCTCCTCTTTTTCGATCAGCTGTTTGTTTTGGTCTTCGAAGACCAATTATCGAGGCTTGA 2595 0.4162 MSSWRSLLLRIGDKSPEYGPSSDFKDHIETCFGALRRELEHSETEILEFLLTCAEQLPHKIPFYGTLIGLINLESEDFVKRLVEKTHSKFQEALDTGNCNGIRILTRLMTVMMCSKALQPNSLVGVFETFLSSAATTVDEEKGNPLWQPCADFYITCILSCLPWGGAELVEQIPEDIERVMVGIEAYLSIRKHTSDTGLSFFENDDEIERDINNKDFLEDLWDRIQVLSSNGWKVESVPRPHLSFEAQLVAGKSHEFGTISCSNLPNPPSVPSGVSFGKEKHEAELKYPQRIRRLNIFPSSKMEDMQPIDRFVVEEYLLDVLLYFNGSRKECASFMVGLPVTFRYEYLMAETIFSQLLMLPQPPFKPVYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRTRLILWFSHHLSNFQFIWPWEEWAYVLDLPRWAPQRVFVQEVLEREVRLSYWDKVKQSIENAPGLEELLPPKGGPNFNLVAEDGKENNEQLLSGNLNDMVKGKAPVREIISWIDESVSSNNSLEVTLRVVIQTLLNIGSKSFTHLITVLERYGQVIAKICPDEDKQIMLIAEVGSFWKSNTQMTAIAIDRMMGYRLISNLAIVRWVFSEDNVEQFHLSDRPWEVLRNAVSKTYNRISDLRKEISSLKRNISSAEVAANEAKTELDVAESKLALVDGEPVVGDNPVRMNRLKSRAEKAKEELVSIQDSIEAKEALLARATDENEALFLLLFKSFSNVLTDRLPKGAGARTLHEWKSAQVEEMAVDLEEQSTMEVDTENQIPQNSQSNGGKKSVAYNVGEKEQWCITTLSYVKAFSRQYATEIWAHIEKLDAEVLTEDAPPLFRSAVCFGLRRPIIEA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03279 864 Gene3D - 493 852 - -
Vivi6g03279 864 Coils Coil 695 729 - -
Vivi6g03279 864 Gene3D - 296 481 - -
Vivi6g03279 864 SUPERFAMILY ARM repeat 478 850 IPR016024 -
Vivi6g03279 864 Coils Coil 637 685 - -
Vivi6g03279 864 Pfam MIF4G like 503 827 IPR015174 GO:0016070
Vivi6g03279 864 Gene3D - 3 268 - -
Vivi6g03279 864 Pfam MIF4G domain 21 196 IPR003890 GO:0003723|GO:0005515
Vivi6g03279 864 Pfam MIF4G like 342 467 IPR015172 GO:0016070
Vivi6g03279 864 PANTHER CAP BINDING PROTEIN 3 853 IPR027159 GO:0000339|GO:0005846|GO:0006406
Vivi6g03279 864 SMART if4_15 1 229 IPR003890 GO:0003723|GO:0005515
Vivi6g03279 864 FunFam Nuclear cap-binding protein 296 481 - -
Vivi6g03279 864 SUPERFAMILY ARM repeat 293 478 IPR016024 -
Vivi6g03279 864 FunFam Nuclear cap-binding protein subunit 1 3 269 - -
Vivi6g03279 864 SUPERFAMILY ARM repeat 2 296 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03279 K12882 - gmx:100811738 1484.54