Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03257 ATGTACGTGGTGCCTCCGCCTCAACGCTCGGATCCGGGTTCAGGATCCGATGGTTTGAGGGTTTATCAAGCCTGGAAAGGAAGCAATAAATTTTTTCTCCAGGGAAGGTTTATATTTGGACCAGATGTGAGATCGTTGGCGCTGACGGTTTTCCTTATTGTTGCTCCTGTCGCAGTTTTCTGTGTCTTTGTTGCCAGAAAACTATTGAATGATTTTTCTGATCACTGGGGGATTTCCGTAATGGCTGTTGCAATCGTTTTCACAGTTTATGACTTGGTTCTTCTTTTGTTAACATCTGGTCGAGATCCTGGCATAATACCACGCAATTTACATCCTCCAGAACCAGAAGGTTTCGATAGTAATGCAGATCTTGGTGCTGGTCAGACTCCCCAATTGAGGTTGCCACGGATTAAGGAGGTTGAGGTCAATGGCGTTGTTGTTAAGGTCAAGTATTGTGATACTTGCATGCTTTACAGGCCTCCTCGATGCTCGCACTGCTCAATCTGTAATAACTGTGTAGAACGGTTTGATCATCACTGTCCCTGGGTCGGTCAGTGTATTGGGCTGCGTAATTATCGCTTCTTCTTCATGTTTGTCTTCTCAACTACGCTACTTTGTGTGTACGTTTTTGCATTTAGCTGGATCTATATTAGAAGAATTATGTCGTATGAGGAAACAACAATTTGGAAGGCAATGATCAAAACTCCAGCCTCCATAGTTTTAATAATTTACACCTTCATATCAATGTGGTTTGTCGGTGGCCTCACCGCATTCCATTTATATCTCATAAGTACAAACCAGACTACTTATGAGAACTTCAGATACCGATATGATCGCCGGGCAAACCCGTATAACAAAGGAGTGATGAATAATTTCAAAGAGATATTCTGCATCAGCATAACCCCCTCAAAGAACCATTTCAGGGCAACAGTGCCAAACGAACCAGCATTACCTGCTCGATCAGTGGGTGGAGGATATATGAACCAAAGTTTGGGAAAACCTGGGGACGACGTAAAGATGGGAAGGAAAGCTGTATGGGAGATGGACGATTCAGATGCTCAAATAAGCAACGATCGTGTGAATGTAAAAGACGGCGAGTTGTCTTCTGAAATTAGGACGACAGTAGATGAAACAGTCGACCGTGTTGGAGTTCATCCTAGGCGATCTAGCTGGGGAAGAAAAAGTGGAAGCTGGGAAATGTCGCCAGAAGTGTTAGCCTTGGCAGCCAGGGTCGGTGAGCAAAATCGTGCAGGTGAAGGTAACAGTGGTAGCACTAGAGAATCATCTTAA 1290 0.4419 MYVVPPPQRSDPGSGSDGLRVYQAWKGSNKFFLQGRFIFGPDVRSLALTVFLIVAPVAVFCVFVARKLLNDFSDHWGISVMAVAIVFTVYDLVLLLLTSGRDPGIIPRNLHPPEPEGFDSNADLGAGQTPQLRLPRIKEVEVNGVVVKVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRFFFMFVFSTTLLCVYVFAFSWIYIRRIMSYEETTIWKAMIKTPASIVLIIYTFISMWFVGGLTAFHLYLISTNQTTYENFRYRYDRRANPYNKGVMNNFKEIFCISITPSKNHFRATVPNEPALPARSVGGGYMNQSLGKPGDDVKMGRKAVWEMDDSDAQISNDRVNVKDGELSSEIRTTVDETVDRVGVHPRRSSWGRKSGSWEMSPEVLALAARVGEQNRAGEGNSGSTRESS 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03257 429 ProSiteProfiles DHHC domain profile. 150 200 - -
Vivi6g03257 429 PANTHER ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN 51 313 - -
Vivi6g03257 429 Pfam DHHC palmitoyltransferase 150 274 IPR001594 GO:0016409
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03257 Vivi-Chr6 122997552 123002589 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03257 79 296 Lipid Metabolism Gene Families AT4G22750 27.313 6.27e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03257 - - gmx:100792069 756.518