Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03239 ATGAAGTCCTCGCTTAACAAGTTGAAGAGAATTGCACTTCACAAAAGTGGTGCAAAGGAGAAGAAGGAGTTTCAGCCTTCTGTGAAGTTCGACGAGCTTGCTCTCGCTGCTAAGTACATGCAAGAGATGAGAGATTGCTATGATAGCCTTCTTGCCGCAGCAGCTGCTACTGAAAACAGCGCTTATGAATTTTCGGAGTCACTGCAAGAGATGGGCACTTGTCTATTGGAAAAAACTGCCTTAAACAATGATGAAGAGAGTGGTAAAGTTTTGGGGATGCTTGGAAATGTGCAGCTTGAGCTTCAAAAACTTGTTGATAACTATCGTTCTCATGTATCACTGACAATAACCAGACCATCGGAGTCTCTTCTTAATGAACTAAGAACTGTTGAGGACATGAAGCGTCAGTGTGATGAAAAAAGGGATGTTTATGAATACATGATTGCCCAACAGAAAGAGAAAGGAAAGTCAAAAAGTGGTAAGGGTGAAAATATAACTGTACAGCATTTGCAAGCTGCTCACGATGAATACGAAGAGGAAGCAACACTCTGTGCTTTTCGGTTAAAATCCCTGAAACAAGGCCAGTCACGTAGTCTCCTAACACAAGCTGCTCGACACCATGCTGCGCAGTTGAATTTCTTTCGGAAGGGACTTAAATCACTGGAGGCTGTTGAGCCACATGTTATGATGGTTGCCGAACTGCAGCATATTGATTACCAATTCAGTGGCCTTGAAGATGATGATGGTAAGGGTAGTTTTGAAGATGATGGGAATGAGTATTCGTATGAGGCTACTGAAGGTGGTGAGTTGAGTTTTAACTACAGATCAAACAAGGATGTCCCCACATCGCCAAACTCAGCAGAGGTGGATGAATCAGGCCGTTCAAATGTTCGAGCTTCAACCACAGAAACCGTAGAGTGGCAGCCAAGTTTAGACAAGTACCATGGAGATTTTAAACTCCCAAATAGAGATCCACCAAGAGTCAGCAGCTATTCAGCTCCAATATTTGCGGAAAAGAAATTTGACCCTGCTGAAAAAGTAAGACAACTGTTGTCATCATCTGCAGCTGTAGCAAAGCCTAATGCTTATGTACTTCCTACACCTGTTGAAATTAAAGAAACAAAAACCAGTTCTGCACCCCGCTTAAGTGCAAGTGGATCTTCACATGATTTGTGGCATTCATCTCCTTTGGATGAAAAAAAGAATGTGAAAGATTTTGTTGATGGAAAATCGTCAGAACCAGCTATTGCTAGATCTCACTCTGTTCTCAAAGAAAGCAACAGTGACACTACATCTGCCCAGTTACCACGCCCGTCGATTGATAAAATAAAAAGGCATGCTTTTTCAGGTCCATTGACTAATCCATTGTCTGTAAAACCTGTATCCGGGGGTTTCCCACGTTTGCCAACACCTCAGCCTTCCTCTCCAAAAGCATCTCCTGGCACTTCTCCTCCCCCTGTTTCTTCACCTAGGATAAGTGAGCTACACGAGCTTCCTAGACCTCCTGGTAATCAAACCAGCAAGGCAATAAAATCTTCTCGAGTAGGTCACTCTGCTCCCTTAGGATTAAGGAATCCTGAGCATCATGCAGCTAATAAATTTCCTCCAGGTGTATCAAGTTCAGCATCTCCACTTCCAACTCCACCCATCATTGTCTCTCGGAGTTTTTCTATACCCTCTAGTAGTCAGAGAGGTGTAGTATTAAATGTTACTAATAAGTATTTGCACACTCACCAAATGCCAGAAAAGGTTGAAGAAGCTGCATCCCATCCACTAACACCTTTATCCCAGAGAGCATCAACTCTATCTGACCTTGCTTCTCACTCTAGTGAAATCAAAGTGGATGCAGGTGGGAGCTAA 1860 0.4306 MKSSLNKLKRIALHKSGAKEKKEFQPSVKFDELALAAKYMQEMRDCYDSLLAAAAATENSAYEFSESLQEMGTCLLEKTALNNDEESGKVLGMLGNVQLELQKLVDNYRSHVSLTITRPSESLLNELRTVEDMKRQCDEKRDVYEYMIAQQKEKGKSKSGKGENITVQHLQAAHDEYEEEATLCAFRLKSLKQGQSRSLLTQAARHHAAQLNFFRKGLKSLEAVEPHVMMVAELQHIDYQFSGLEDDDGKGSFEDDGNEYSYEATEGGELSFNYRSNKDVPTSPNSAEVDESGRSNVRASTTETVEWQPSLDKYHGDFKLPNRDPPRVSSYSAPIFAEKKFDPAEKVRQLLSSSAAVAKPNAYVLPTPVEIKETKTSSAPRLSASGSSHDLWHSSPLDEKKNVKDFVDGKSSEPAIARSHSVLKESNSDTTSAQLPRPSIDKIKRHAFSGPLTNPLSVKPVSGGFPRLPTPQPSSPKASPGTSPPPVSSPRISELHELPRPPGNQTSKAIKSSRVGHSAPLGLRNPEHHAANKFPPGVSSSASPLPTPPIIVSRSFSIPSSSQRGVVLNVTNKYLHTHQMPEKVEEAASHPLTPLSQRASTLSDLASHSSEIKVDAGGS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03239 619 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 610 IPR037488 -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 393 408 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 375 549 - -
Vivi6g03239 619 CDD BAR 40 227 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 593 608 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 580 619 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 266 303 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 421 437 - -
Vivi6g03239 619 SUPERFAMILY BAR/IMD domain-like 33 228 IPR027267 -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 466 487 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 375 392 - -
Vivi6g03239 619 MobiDBLite consensus disorder prediction 270 303 - -
Vivi6g03239 619 Gene3D Arfaptin homology (AH) domain/BAR domain 31 246 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03239 Vivi-Chr6 122594839 122601590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03239 - - tpra:123890481 998.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03239 6 122594839 122601590 Vivi6g03239 6 122594839 122601590 ECH