Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03107 ATGGGTTGCGCGGCGTCGAAGCTGGAAAACGAAGACACTGTACGGCGGTGCAAAGACCGTCGCCGTCTCATGAAGGAAGCTGTTTACGCGCGTCACCATCTCGCCGCTGCACACTCCGACTACTGCCGTTCACTTCGCCTCACTGGTTCTGCTCTCTCTACATTCGCCGCCGGTGAGCCTCTTTCCGTCTCCGATAACACCCCCGCCGTGTTCATCAACCATAAAACAACCACCCCTACCCCCACCACCGCCACAAAAACGTTCCACCATCCACCAAAACCACAACCACCGTCTCCTTCACCGTCTTCCTTCCACCACCGTCCTCCGCCGCAGCAACCGTTTCAACCTTCACCTTCTCCAACAATAACCTCCTCAAAACTCCCTCACATTCTCTCTTCATCCACAAATGAACACCACCACCCTCGCCGCCGTAAACCACCGGCTCCGAAGCTCCCTCACATTCTCTCCGATTCAAGCCCTTCTTCTACACCTCGAAGCAACTTCTCCAACAATTTTGCTCCGGGTTTCTTCCCTACAGCACACTCTACATACTCTTCCACCCCTTCTCAAACTTCCTCAGTTTGGAACTGGGAGAATTTCTACCCTCCTCCTCCACCGCCACCGGGCTCCGATTACTTCGATCGAGAGCACGAGCACGAACACGAACACGACCAAGAAGATGCTACTTCACAATTCTCTTTCAAGTCACGAAATAGTGAAATTCCTTATTCCCGACAACAACCTCAGCAACAACATCAACAACAACAACAACGACAACAACCTCAACAGCCACAAATACAAACATATCAACAACAACAGCAACAACGTTATCCTAATCTAACAGCACATGAAGTAGAAGGATTTGATTCTGAGAGATCAGAGTATGATTACTTCAACAGAAAACTCGCAACGGTTCAGAAGAATCCTAGTCATCATCATTTGGATGAACAACACACGGAGACGGAACGAGAGGAAGTTGAGTGTAGTGAATGGGGAGATCATTACAGCACAACTTCATCTTCCGAGGAGGACGACGAAGAGGATGAAGAAGATGACGATGGGGTTGATGGGGATGTTGAGTCAAGGTCTGAGATTGGGACTAGATCGAATTTCGGGTCATCGTCTGCGGCTGCAAAGGGATATGTTGCGGCGGTGGGGAAATCGGACGATGTAGCATCGTCTTCTTCGACGGGTGAAGGGGTAATTGATATGAAAATGGTTGTGAGACATAGAGATTTGAAGGAGATTGTGGATTCGATTAAGGAGAATTTCGATAAAGCTGCTGTTGCTGGAGATCAAGTTTCTGAGATGCTTGAGATTAGTAAAGCTCAGCTTGATCGAAGTTTCAGGCAATTGAGGAAAACTGTGTATCACTCAAATAGTCTATTGAGCAGCCTGAGCTCAACTTGGACCTCAAAACCACCTTTGGCGGTGAAGTACCGGCTCGAACCTGGTTCTTTGGATGAACCGGGCGGTCTGAAGAGTCTCTGCTCGTCTTTAGAACGGCTTTTGGCTTGGGAGAAGAAGCTCTATGATGAAGTCAAGTCTAGAGAAGGTGTGAAGATTGAACATGAAAAGAAATTGTCAGCCCTGCAGAGTCAGGAATACAAAGGAGACGATGAAGCAAAGATATTCAAAACCAAGACTTCCATAAATAAGCTGCAGTCGCTAATTGTTGTCACATCACAAGCGGTGTCTACCACCTCGACTGCTATTGTTGGCCTAAGAGACTCCGATCTTGTTCCTCAGCTTGTTGAGCTCTGTCATGGAATGATGTATATGTGGAGATCAATGCATCAGTACCATGAAGTCCAAAGCAACATAGTTCAGCAAGTTCGCGGCCTGGTGAATAGATCGGGAGGAGGCGATTCAACTTCTGAACTGCACAGACAGGCAACTCGTGACCTTGAATCCGCTGTTTCGGCTTGGCACTCGAGTTTTTGTCGCCTTATAAAATTTCAACGGGACTTTATTCTTTCCCTACATGGTTGGTTTAAGCTTAGTCTTATGCCGGTTGATAACGATAAAGTCAACAACAGGGTGGACCACTCTGGTGCTGACATGTTTTTTGACGACTGGAAGCTTGCACTTGACCGTGTCCCTGATACCGTTGCGTCTGAAGCCATCAAGAGCTTTATCAATGTTGTCCATGTGATATCTTCCAAGCAAGCCGAAGAGCTCAAGATAAAGAAGCGAACCGAGAACGCTTCCAAGGAACTCGAGAAAAAGGCTTCGTCTGTACGGAATATAGAAAGAAAGTTTTACAGTTCGTATTCTTTGGTAGGGATTAGCCTTCCTGACTCCGCGCCTGATAACGGACAAGGTTTAGACGCGCGCGATCCACTCGCCGAGAAAAAACTAGAACTAGCAACATGCCAAAGGCGCGTTGAAGATGAAATGATGAAGCATTCGAAAGCCGTTGAGGTAACACGAGCAATGACACTCAACAACCTACAGACAGGCTTGCCCGGAGTCTTTCAAGCACTGACCAGTTTTTCTTCGTTGTTCACCGAGGCTCTCGACTCGGTGTGTACTCGATCGTACGCCATCAAATAG 2556 0.4777 MGCAASKLENEDTVRRCKDRRRLMKEAVYARHHLAAAHSDYCRSLRLTGSALSTFAAGEPLSVSDNTPAVFINHKTTTPTPTTATKTFHHPPKPQPPSPSPSSFHHRPPPQQPFQPSPSPTITSSKLPHILSSSTNEHHHPRRRKPPAPKLPHILSDSSPSSTPRSNFSNNFAPGFFPTAHSTYSSTPSQTSSVWNWENFYPPPPPPPGSDYFDREHEHEHEHDQEDATSQFSFKSRNSEIPYSRQQPQQQHQQQQQRQQPQQPQIQTYQQQQQQRYPNLTAHEVEGFDSERSEYDYFNRKLATVQKNPSHHHLDEQHTETEREEVECSEWGDHYSTTSSSEEDDEEDEEDDDGVDGDVESRSEIGTRSNFGSSSAAAKGYVAAVGKSDDVASSSSTGEGVIDMKMVVRHRDLKEIVDSIKENFDKAAVAGDQVSEMLEISKAQLDRSFRQLRKTVYHSNSLLSSLSSTWTSKPPLAVKYRLEPGSLDEPGGLKSLCSSLERLLAWEKKLYDEVKSREGVKIEHEKKLSALQSQEYKGDDEAKIFKTKTSINKLQSLIVVTSQAVSTTSTAIVGLRDSDLVPQLVELCHGMMYMWRSMHQYHEVQSNIVQQVRGLVNRSGGGDSTSELHRQATRDLESAVSAWHSSFCRLIKFQRDFILSLHGWFKLSLMPVDNDKVNNRVDHSGADMFFDDWKLALDRVPDTVASEAIKSFINVVHVISSKQAEELKIKKRTENASKELEKKASSVRNIERKFYSSYSLVGISLPDSAPDNGQGLDARDPLAEKKLELATCQRRVEDEMMKHSKAVEVTRAMTLNNLQTGLPGVFQALTSFSSLFTEALDSVCTRSYAIK 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03107 851 Coils Coil 730 753 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 183 276 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 90 117 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 118 134 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 155 170 - -
Vivi6g03107 851 Pfam Protein of unknown function (DUF632) 413 717 IPR006867 -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 183 198 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 72 170 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 231 276 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 340 358 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 72 89 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 308 331 - -
Vivi6g03107 851 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Vivi6g03107 851 PANTHER UNCHARACTERIZED 1 845 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 211 230 - -
Vivi6g03107 851 MobiDBLite consensus disorder prediction 307 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03107 Vivi-Chr6 119285976 119291521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03107 498 665 Acyl Lipid Metabolism Gene Families AT2G27090 37.427 5.36e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03107 - - gmx:100815888 1062.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03107 6 119285976 119291521 Vivi6g03107 6 119285976 119291521 ECH
Vivi7g03323 7 98722126 98734008 Vivi6g03107 6 119285976 119291521 PCT