Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03015 ATGGGTTTGTGTCCGTGTTTCGGCGTCGAAACATCCGAACAACCACCACTAGCGGATCGTGATCCGGTTCTACTCGTATCAGGCATGGGTGGCTCCATTCTCCAATCAAAGCCCAAGAAATTCGGATTAACCACCCGTGTTTGGGTCAGAATCTTCCTCGCTGACTTAGAGTTCCGAAAGAAGATTTGGTCAATTTACAATCCCAAAACAGGTTATACTGAAGCGTTAGACACGAAATCAGAACTTGTTGTTCCGGAGGATGATCATGGTCTCTATGCAATTGATATTCTAGATCCATCATGGTTTGTAAAATGTGTGCATTTGACAGAGGTGTATCATTTTCATGACATGATTGACATGCTTGTTGGATGTGGGTATGTTAAAGGAACTACTTTGTTTGGATACGGATATGATTTCAGACAAAGCAATAGGATGGATAAGTTAATGGATGGCCTTAAGCTGAAGTTGGAAACTGCTTACAAAGCCTCTGGTGGAAGAAAAGTCAATATAATTTCACACTCCATGGGAGGGGTTATGATCTTGTGTTTCATGTCACTTTGCAGAGATGCATTTTCAAAATATGTGAATAAGTGGATTGCCTTGGCCTGCCCTTTCCAAGGAGCCCCAGGATGCATCAATGATTCTCTATTAACTGGATTAGAATTTGTTGAGGGCTTAAAAAGCTATTTTTTTGTATCAAGGTGGACTTTTCATCAATTGCTAGTTGAGTGCCCATCAATCTATGAGATGTTGGCAAATCCGGATTATAAATGGAAAAAGAAGCCAGAAATTAAAGTTTGGCGAAAGCTGAACAAGGATGGGAATGAAAATATCAATTTGGAATCTTATGGACCAACCCAGAGTATCTCTGTATTTGAAGGAGCACTGAGGGACAATGAGCTAAAGTATAACGGGAAATCAATACCACTGCCCTTTAATACAACTATCTTTAAATGGGCTACTGGAACTCGTCAAGTTATAAGTAACGCTAAACTACCAAACGGAGTCTGCTTCTATAACATTTATGGAACATCATTTGAAACACCTTTTGATGTTTGCTATGGTTCGGAAAAATCGCCAATTGAGGACTTATCTGAAATATGCAAGACATTGCCACAATATTCTTATGTTGATGGAGATGGATCAGTTCCTGTTGAATCTGCCAAGGCCGATGGACTTGAAGCTGTTGAAAGGGTAGGAGTTACTGCTGATCACCGAGGATTATTACGAGACAAAACTGTATTTAAACTTATTCAGAAATGGTTGGATATTGAGCCAGTGGTAAGCAAGCATTCTAAAACATCAAAAGTAGCAGATGTGAATATAATCAACCCTATGGTTCTCTAA 1347 0.3972 MGLCPCFGVETSEQPPLADRDPVLLVSGMGGSILQSKPKKFGLTTRVWVRIFLADLEFRKKIWSIYNPKTGYTEALDTKSELVVPEDDHGLYAIDILDPSWFVKCVHLTEVYHFHDMIDMLVGCGYVKGTTLFGYGYDFRQSNRMDKLMDGLKLKLETAYKASGGRKVNIISHSMGGVMILCFMSLCRDAFSKYVNKWIALACPFQGAPGCINDSLLTGLEFVEGLKSYFFVSRWTFHQLLVECPSIYEMLANPDYKWKKKPEIKVWRKLNKDGNENINLESYGPTQSISVFEGALRDNELKYNGKSIPLPFNTTIFKWATGTRQVISNAKLPNGVCFYNIYGTSFETPFDVCYGSEKSPIEDLSEICKTLPQYSYVDGDGSVPVESAKADGLEAVERVGVTADHRGLLRDKTVFKLIQKWLDIEPVVSKHSKTSKVADVNIINPMVL 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03015 448 Pfam Lecithin:cholesterol acyltransferase 65 270 IPR003386 GO:0006629|GO:0008374
Vivi6g03015 448 Gene3D alpha/beta hydrolase 80 423 IPR029058 -
Vivi6g03015 448 SUPERFAMILY alpha/beta-Hydrolases 19 415 IPR029058 -
Vivi6g03015 448 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 14 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g03015 Vivi-Chr6 117535786 117540171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g03015 4 439 Acyl Lipid Metabolism Gene Families AT3G03310 68.182 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03015 K22389 - gmx:100797043 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03015 6 117535786 117540171 Vivi6g03015 6 117535786 117540171 ECH