Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g03001 ATGGACGCTATACGGAAGCAGCTCGATGTGCTCATGGGAGCCAATCGAAACGGCGACGTCCGTGAAGTTAACCGCAAGTATTACGATCGCGACGTTTGCCGTCTCTACCTCGTCGGTCTTTGCCCTCACGAACTCTTCCAGTTAACGAAAATGGATATGGGTCCATGCCCTAAGGTTCACTCATTGCAGCTCAGAAAAGAATATGAGGAAGCCAGAGGCAAAGGGATCGATAATTATGAGAGGGAGTTGGAGGATGTTATAGATAAGCTTATTGGTGAATGTGATAGGAAAATTGGGAGAGCTCTTAAGCGACTCGAGGATGATGATGCTAAAGCGGCAATTGCAATTTCAGTATCTGAAGTTACTCAGACACCGGAAGTGCTTGAGTTGGCCAAGGAAATCAAAGAAAAGTTGAAAGAAGCGGATAAATATGATCTTGAAGGCTTGTCAGATATGAAGATTAGAGCTTTGGAGATTGTTGAAGAACTTAGAATCAAAAGAGCAGACAAACAGTCTACGCTTCTTTTAGATGCATTCAACAAAGATAGGGCATCTTTACCTCAACCTCTGCCTAATCCACCACCATTGGCACCCCTTCCTGTAATTACTCCCGATGCTCGAACACAGGAGATGATAAATGAAAAGTTGAAGAAGGCTGAGGATCTTGGTGAACAAGGATTGATTGATGAGGCCCAGAAAGCATTGGAAGAGGCCGAAGCTCTTAAGAAGCTTCCTTCCAGGCAGGAGCCAGCACTGGATTCATCCAAGTATACCGCTGCAGACGTGCGGATTACTGATCAAAAGCTACGTGTGTGCGATATCTGTGGAGCATTTCTAAGTGTGTATGACAGTGATCGTCGATTAGCTGATCATTTTGGAGGGAAACTTCATTTAGGGTATATGCAAATTCGTGAGAAGTTGGCAGAACTTCAAGAAGAAAGGAACAAGAGCCGTAAGACTGATCGTCTTGATGATAGAAGATCAAAAGAAAGGAGTAGGGATCGTGACAGGGAGCCGAGTAGGGACCGTGAACGTGGTGAGAGCCATGAGCGAGGGCGAGACAATGATCGCAGGAGCAGGGACCGTGATAGGCACCATGATAGAGACCGTGGATATGACCGAGATCGGGACAGAGACTCATCCCGCTCATATGATTCAAGAAGTCGTCGGAGGTCACGATCTCGAGAGCGTTCTAGAGATTATGACCGTCATAGGCGTCATGATCGGTATTAG 1233 0.4623 MDAIRKQLDVLMGANRNGDVREVNRKYYDRDVCRLYLVGLCPHELFQLTKMDMGPCPKVHSLQLRKEYEEARGKGIDNYERELEDVIDKLIGECDRKIGRALKRLEDDDAKAAIAISVSEVTQTPEVLELAKEIKEKLKEADKYDLEGLSDMKIRALEIVEELRIKRADKQSTLLLDAFNKDRASLPQPLPNPPPLAPLPVITPDARTQEMINEKLKKAEDLGEQGLIDEAQKALEEAEALKKLPSRQEPALDSSKYTAADVRITDQKLRVCDICGAFLSVYDSDRRLADHFGGKLHLGYMQIREKLAELQEERNKSRKTDRLDDRRSKERSRDRDREPSRDRERGESHERGRDNDRRSRDRDRHHDRDRGYDRDRDRDSSRSYDSRSRRRSRSRERSRDYDRHRRHDRY 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g03001 410 PANTHER RNA-BINDING PROTEIN LUC7-RELATED 1 406 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vivi6g03001 410 Coils Coil 300 320 - -
Vivi6g03001 410 Coils Coil 127 147 - -
Vivi6g03001 410 Pfam LUC7 N_terminus 208 325 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vivi6g03001 410 Pfam LUC7 N_terminus 2 172 IPR004882 GO:0003729|GO:0005685|GO:0006376
Vivi6g03001 410 MobiDBLite consensus disorder prediction 312 410 - -
Vivi6g03001 410 Coils Coil 224 244 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g03001 - - gmx:100793888 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g03001 6 117372064 117377458 Vivi6g03001 6 117372064 117377458 ECH