Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02998 ATGGCTATGGCTGGTGGGGTTTCAATTTTGCCATCTATTCATCTTCTTCTCCTTCTCGTAAGCGTTTCTTGGTATTGTACCTTTGTTAAGGGTTCAAATTCAACAACCATATATGATGAATTAAGGGCAAAGGGTCTTCCGGAAGGGCTTCTACCGAAGGGAATAACACGGTATGAGATCAATGGTACCAGTGGTGAATTTCAGGTTTGGATGGAAGAACCGTGTAATGCAAAATTTGAAAACGAGGTTCACTATGATCCGAACATTAAGGGTACCCTAGATTATGGTAAGATCGGGGGATTATCTGGTATGACTGCTCAGGAACTTTTCCTATGGTTCCCGGTTAAGGGCATTCGTGTTGATCTACCTAGCTCTGGTCTCATTCATTTCGATGTTGGTGTTGCTGATAAACAATTCTCTTTGTCCCTCTTTGAAGATCCTCCTGATTGTAACCCTCAGGTTAATGGTGATAGTGATGATGTGCGGAGGGCAGTTTGGTAG 501 0.4291 MAMAGGVSILPSIHLLLLLVSVSWYCTFVKGSNSTTIYDELRAKGLPEGLLPKGITRYEINGTSGEFQVWMEEPCNAKFENEVHYDPNIKGTLDYGKIGGLSGMTAQELFLWFPVKGIRVDLPSSGLIHFDVGVADKQFSLSLFEDPPDCNPQVNGDSDDVRRAVW 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02998 166 Pfam Protein of unknown function, DUF538 38 145 IPR007493 -
Vivi6g02998 166 SUPERFAMILY At5g01610-like 12 151 IPR036758 -
Vivi6g02998 166 Gene3D - 21 153 IPR036758 -
Vivi6g02998 166 PANTHER T31J12.3 PROTEIN-RELATED 26 150 IPR007493 -
Vivi6g02998 166 FunFam Uncharacterized protein At3g07460 25 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02998 Vivi-Chr6 117348234 117349845 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02998 - - gmx:100778787 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02998 6 117348234 117349845 Vivi6g02998 6 117348234 117349845 ECH