Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02996 ATGGCTCTAAATCTCTGCACCTCCCCTAAATGGATCGGCACCACCGTCTTCGATAGTGCTTCTTCATCGAAGCTTTCACTTGCTTCCTCTTCTTCTACTACTTCATTTTCTTCTTCCATTTTAAGTTCGAAGAATGTTGGTATACAGAGGTTGAGCTTGAGGAGGAATGGTGGTCTCAGTGTAAGATCCAGCTTGGAAACTGCGGGACCCACGGTGACGGTAGGGAAAGTGACTGAGGTTAACAAGGATACGTTTTGGCCCATCGTTAATGCCGCCGGTGATAAAGCCGTCGTCCTCGATATGTTCACCAAATGGTGTGGTCCTTGCAAAGTGATAGCTCCATTATACGAAGAATTATCTCAGAAGTATTTGGATGTTGTCTTTCTAAAGCTTGATTGCAACCAAGATAACAAGTCCTTGGCAAAAGAGCTAGGAATTAAGGTGGTTCCCACTTTTAAAATTCTGAAGGACAGCAAGATTGTAAAAGAAGTAACTGGTGCTAAATTTGATGATTTGCTCGCTGCCATTGACAGTGTTCGGTCTAGTTAG 549 0.4353 MALNLCTSPKWIGTTVFDSASSSKLSLASSSSTTSFSSSILSSKNVGIQRLSLRRNGGLSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKAVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDSKIVKEVTGAKFDDLLAAIDSVRSS 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02996 182 PANTHER THIOREDOXIN-LIKE PROTEIN 1 76 177 - -
Vivi6g02996 182 PRINTS Thioredoxin family signature 97 105 - -
Vivi6g02996 182 PRINTS Thioredoxin family signature 105 114 - -
Vivi6g02996 182 PRINTS Thioredoxin family signature 145 156 - -
Vivi6g02996 182 ProSiteProfiles Thioredoxin domain profile. 59 181 IPR013766 -
Vivi6g02996 182 CDD TRX_family 83 177 - -
Vivi6g02996 182 Gene3D Glutaredoxin 62 181 - -
Vivi6g02996 182 ProSitePatterns Thioredoxin family active site. 98 116 IPR017937 -
Vivi6g02996 182 Pfam Thioredoxin 77 176 IPR013766 -
Vivi6g02996 182 SUPERFAMILY Thioredoxin-like 71 179 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02996 Vivi-Chr6 117334070 117336502 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02996 K03671 - gmx:100306555 236.498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02996 6 117334070 117336502 Vivi6g02996 6 117334070 117336502 ECH