Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02955 ATGGCACCGCGATTCAGAACCGTTCTCGCTCTTCGCCTCTTCATTCTCTTGTGCTTAATCTTCCAAACCTTCGCTCAGGATTCTCTGGCGCATAATGAGAGGCAAGATTCCGGTGGATCTGTGGATCTAGGTCGCCGTGCCAAACTTGCATTGAATGGTTTAGAGAATGGCGCGGTTCTTCCTCTTAGCTTGGATTCCTCAGGTGTTGGACTCTTTGATGCTTTCTTTGCTAGTCTATCAATGATTCTCGTCAGTGAGATTGGGGATGAGACATTTATAATAGCAGCTCTCATGGCTATGCGTCACCCTAAGTCAATTGTTTTGTCCGGTGCGCTCACAGCCTTGATTATAATGACAGTACTTTCAACAGGGCTAGGAAGGATTGTGCCAAATTTGATTTCAAAGAAGCATACAAATAGTGCTGCTACAGTTCTTTATCTTTTCTTTGGGTTACGTCTGCTGTACATTGCTTGGAGATCAGACCCAAAATCTTCACAGAAGAAAGAAATGGAAGAAGTTGAAGAAAAACTTGAAGGTGGGCAAGGTAAAACTTCATACCGGCGGTTCCTTTCAAGATTTTGTACACCTATATTTTTGGAGTCTTTTATTTTAACATTCCTTGCCGAGTGGGGTGACCGTAGCCAGATTGCAACAATTGCACTGGCAACACACAAAAATGCAATTGGAGTAGCAGTTGGGGCCACTATAGGACACACAATCTGCACCTCAGTAGCAGTGGTTGGAGGAAGCATGCTGGCATCTAGAATTTCCCAACGCTCTGTAGCCACTGTTGGTGGCCTTCTCTTCCTCGGCTTTTCTTTGTCTTCATACTTCTACCCTCCTCTTGATTAA 852 0.4448 MAPRFRTVLALRLFILLCLIFQTFAQDSLAHNERQDSGGSVDLGRRAKLALNGLENGAVLPLSLDSSGVGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALTALIIMTVLSTGLGRIVPNLISKKHTNSAATVLYLFFGLRLLYIAWRSDPKSSQKKEMEEVEEKLEGGQGKTSYRRFLSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAVGATIGHTICTSVAVVGGSMLASRISQRSVATVGGLLFLGFSLSSYFYPPLD 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02955 283 Coils Coil 163 183 - -
Vivi6g02955 283 PANTHER TRANSMEMBRANE PROTEIN HTP-1 RELATED 53 279 IPR001727 -
Vivi6g02955 283 Pfam Uncharacterized protein family UPF0016 200 272 IPR001727 -
Vivi6g02955 283 Pfam Uncharacterized protein family UPF0016 77 150 IPR001727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02955 Vivi-Chr6 116728455 116731916 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02955 K23541 - gmx:100785207 432.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02955 6 116728455 116731916 Vivi6g02955 6 116728455 116731916 ECH