Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g02949 ATGATTGGGTGGGAAGATGTGTACAAAGTAATAGTAGCAGTGGTGCCACTCTACTTTGCACTACTATTAGGTTATGGCTCCGTAAGGTGGTGGAAAATTTTCACAAGAGAACAATGTGATGCAATAAACAAACTAGTTTGTTACTTCACATTACCTCTCTTCGCCTTCCAGTTCACCGCGCACATCGATCCGTTCAAGATGAACTTCTTATTCATAGGCGCGGACACTCTATCGAAGCTAATCATCGTCGCGGTGATTGGCCTTTGGGCTAAGTGTAGTAGCAAAGGAAGTTCTAGTTGGTCTATAACAAGCTTCTCTTTGTGTACTCTAACAAACTCTCTTGTTGTTGGAATACCTATGGTGAAACCTATGTATGGAGCCTTAGGTGTGGACCTTGTAGTACAAGGTTCGGTTGTTCAAGCTATTGTATGGCTCACTTTGCTTCTATTTGTGTTGGAATTTAGAAGAACGGGGTTAGAAGGAACTATTAGTACTACTAGTAGTGCTAGCTTGAAACCAAAGGCTAGTAGTATTAGTAGTGTGATGATGGGTGAAGGTGAAGAAGGGAAAGATTTGGAGGGGAATATAATTGGGATGGATGTGATATTGGAAGATGGAAGTAGTAAGCTTCCTTTCTTTGAATTGATGAAACGTGTGTGGCTCAAGTTTATAGTGAATCCAAATTCATATGCTTGTGTTATTGGCATTTCATGGGCTTTCATATCTAATAGGTGGAATTTGGAATTGCCAAGCATGGTAGATGGATCTATATTGATCATGTCAAGAGCAGGGACAGGCACTGCCATGTTTAGTATGGGTATTTTCATGGCACTTCAAGAGAAAGTGATATCTTGTGGACCAAGTTTAGCCATATTTGGTTTAGTTTTAAAGTTCATTGCTGGTCCAGCTGCAATGGCTATTAGTGCCATCGTTGTAGGATTGCGTGGTGATGTTTTACGAATTGCCATAATTCAGGCAGCAATTCCACAATCCATCACTTCCTTCATCTTTGCTAAAGAATATGGATTGCATGCTGACGTTCTTAGCACTGCGGTGATATTTGGAATGATTGTTTCTCTACCGATCTTAGTCGCCTTCTACGTAATATTGGAGTTCATTCATTGA 1125 0.4053 MIGWEDVYKVIVAVVPLYFALLLGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFQFTAHIDPFKMNFLFIGADTLSKLIIVAVIGLWAKCSSKGSSSWSITSFSLCTLTNSLVVGIPMVKPMYGALGVDLVVQGSVVQAIVWLTLLLFVLEFRRTGLEGTISTTSSASLKPKASSISSVMMGEGEEGKDLEGNIIGMDVILEDGSSKLPFFELMKRVWLKFIVNPNSYACVIGISWAFISNRWNLELPSMVDGSILIMSRAGTGTAMFSMGIFMALQEKVISCGPSLAIFGLVLKFIAGPAAMAISAIVVGLRGDVLRIAIIQAAIPQSITSFIFAKEYGLHADVLSTAVIFGMIVSLPILVAFYVILEFIH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g02949 374 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 371 - -
Vivi6g02949 374 Pfam Membrane transport protein 10 367 IPR004776 GO:0016020|GO:0055085
Vivi6g02949 374 NCBIfam auxin efflux carrier 1 370 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g02949 Vivi-Chr6 116649004 116653320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g02949 1 351 Organic Solute Cotransporters AT5G16530 65.909 4.90e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g02949 K13947 - gmx:100784879 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g02949 6 116649004 116653320 Vivi6g02949 6 116649004 116653320 ECH